Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MAP1LC3AQ9H492 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MAP1LC3AQ9H492 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MAP1LC3AQ9H492 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MAP1LC3AQ9H492 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.94□□□□□ -0.02
MAP1LC3AQ9H492 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.94□□□□□ -0.02
MAP1LC3AQ9H492 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.93□□□□□ -0.02
MAP1LC3AQ9H492 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.92□□□□□ -0.02
MAP1LC3AQ9H492 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MAP1LC3AQ9H492 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 TCF3P1-201ENST00000423021 1937 ntBASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 AC241377.3-202ENST00000626088 1088 ntBASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 AC241585.3-202ENST00000628937 1088 ntBASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 AC245100.8-202ENST00000629247 1058 ntBASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.9□□□□□ -0.02
MAP1LC3AQ9H492 AP000974.1-201ENST00000623909 2387 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms