Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
NSMCE2Q96MF7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.27■□□□□ 0.68
NSMCE2Q96MF7 BX842568.3-201ENST00000418104 571 ntBASIC19.27■□□□□ 0.68
NSMCE2Q96MF7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.27■□□□□ 0.68
NSMCE2Q96MF7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NSMCE2Q96MF7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NSMCE2Q96MF7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.27■□□□□ 0.68
NSMCE2Q96MF7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NSMCE2Q96MF7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
NSMCE2Q96MF7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NSMCE2Q96MF7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.27■□□□□ 0.68
NSMCE2Q96MF7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NSMCE2Q96MF7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
NSMCE2Q96MF7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NSMCE2Q96MF7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 AL035685.1-201ENST00000636663 812 ntBASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 AP004607.4-201ENST00000530158 1459 ntBASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NSMCE2Q96MF7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 MIR4466-201ENST00000606121 54 ntBASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 AC116562.4-201ENST00000641316 2276 ntBASIC19.25■□□□□ 0.67
NSMCE2Q96MF7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 AIRN-201ENST00000601203 4374 ntBASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NSMCE2Q96MF7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 AC018445.3-201ENST00000624177 1945 ntBASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 AL020996.1-203ENST00000536896 2307 ntBASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NSMCE2Q96MF7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms