Protein–RNA interactions for Protein: Q8TA94

ZNF563, Zinc finger protein 563, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563Q8TA94 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF563Q8TA94 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF563Q8TA94 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ZNF563Q8TA94 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF563Q8TA94 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF563Q8TA94 AC091799.1-201ENST00000422823 811 ntBASIC18.77■□□□□ 0.6
ZNF563Q8TA94 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ZNF563Q8TA94 AC007322.3-201ENST00000426526 701 ntBASIC18.77■□□□□ 0.6
ZNF563Q8TA94 TERF1P5-201ENST00000477545 1207 ntBASIC18.77■□□□□ 0.6
ZNF563Q8TA94 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF563Q8TA94 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF563Q8TA94 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF563Q8TA94 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF563Q8TA94 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF563Q8TA94 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF563Q8TA94 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ZNF563Q8TA94 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
ZNF563Q8TA94 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.77■□□□□ 0.59
ZNF563Q8TA94 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF563Q8TA94 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF563Q8TA94 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ZNF563Q8TA94 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF563Q8TA94 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF563Q8TA94 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF563Q8TA94 AC138932.1-201ENST00000534164 6830 ntBASIC18.75■□□□□ 0.59
ZNF563Q8TA94 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ZNF563Q8TA94 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.75■□□□□ 0.59
ZNF563Q8TA94 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ZNF563Q8TA94 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF563Q8TA94 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ZNF563Q8TA94 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF563Q8TA94 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF563Q8TA94 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNF563Q8TA94 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF563Q8TA94 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNF563Q8TA94 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF563Q8TA94 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 AC007225.1-201ENST00000566331 1836 ntBASIC18.74■□□□□ 0.59
ZNF563Q8TA94 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 BID-214ENST00000617586 542 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.74■□□□□ 0.59
ZNF563Q8TA94 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 AC022517.1-201ENST00000592429 346 ntBASIC18.73■□□□□ 0.59
ZNF563Q8TA94 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 AC011767.1-201ENST00000617410 1153 ntBASIC18.73■□□□□ 0.59
ZNF563Q8TA94 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF563Q8TA94 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF563Q8TA94 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms