Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RORAP35398 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RORAP35398 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RORAP35398 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RORAP35398 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RORAP35398 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.47■□□□□ 0.71
RORAP35398 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RORAP35398 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RORAP35398 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RORAP35398 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RORAP35398 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RORAP35398 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RORAP35398 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RORAP35398 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.46■□□□□ 0.71
RORAP35398 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
RORAP35398 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.46■□□□□ 0.71
RORAP35398 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.46■□□□□ 0.71
RORAP35398 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.46■□□□□ 0.71
RORAP35398 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.46■□□□□ 0.71
RORAP35398 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RORAP35398 AC066615.1-201ENST00000640911 628 ntBASIC19.46■□□□□ 0.71
RORAP35398 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RORAP35398 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RORAP35398 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.46■□□□□ 0.71
RORAP35398 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RORAP35398 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RORAP35398 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RORAP35398 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RORAP35398 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RORAP35398 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.45■□□□□ 0.7
RORAP35398 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RORAP35398 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RORAP35398 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RORAP35398 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.45■□□□□ 0.7
RORAP35398 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RORAP35398 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.45■□□□□ 0.7
RORAP35398 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RORAP35398 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RORAP35398 HLA-B-256ENST00000639848 1089 ntBASIC19.45■□□□□ 0.7
RORAP35398 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.45■□□□□ 0.7
RORAP35398 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RORAP35398 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RORAP35398 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RORAP35398 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.45■□□□□ 0.7
RORAP35398 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.45■□□□□ 0.7
RORAP35398 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.45■□□□□ 0.7
RORAP35398 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RORAP35398 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.44■□□□□ 0.7
RORAP35398 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RORAP35398 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RORAP35398 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RORAP35398 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RORAP35398 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RORAP35398 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RORAP35398 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RORAP35398 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
RORAP35398 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.44■□□□□ 0.7
RORAP35398 AC060766.5-201ENST00000590539 871 ntBASIC19.44■□□□□ 0.7
RORAP35398 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RORAP35398 AC105020.6-201ENST00000621523 1217 ntBASIC19.44■□□□□ 0.7
RORAP35398 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RORAP35398 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RORAP35398 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RORAP35398 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RORAP35398 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RORAP35398 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RORAP35398 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RORAP35398 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RORAP35398 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RORAP35398 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RORAP35398 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RORAP35398 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.43■□□□□ 0.7
RORAP35398 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RORAP35398 AC026366.1-201ENST00000488803 879 ntBASIC19.43■□□□□ 0.7
RORAP35398 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RORAP35398 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RORAP35398 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RORAP35398 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.43■□□□□ 0.7
RORAP35398 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.43■□□□□ 0.7
RORAP35398 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RORAP35398 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RORAP35398 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RORAP35398 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RORAP35398 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RORAP35398 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RORAP35398 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.42■□□□□ 0.7
RORAP35398 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RORAP35398 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RORAP35398 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RORAP35398 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RORAP35398 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RORAP35398 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RORAP35398 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.42■□□□□ 0.7
RORAP35398 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RORAP35398 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.41■□□□□ 0.7
RORAP35398 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RORAP35398 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RORAP35398 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.41■□□□□ 0.7
RORAP35398 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.41■□□□□ 0.7
RORAP35398 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms