Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.483e-6■■■□□ 14.6
PRPF8Q6P2Q9 U2AF1L5-209ENST00000636923 3339 ntTSL 211.81□□□□□ -0.521e-9■■■□□ 14.6
PRPF8Q6P2Q9 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.523e-6■■■□□ 14.6
PRPF8Q6P2Q9 CSF3R-215ENST00000533491 512 ntTSL 511.19□□□□□ -0.621e-9■■■□□ 14.6
PRPF8Q6P2Q9 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC9.37□□□□□ -0.911e-9■■■□□ 14.6
PRPF8Q6P2Q9 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC9.18□□□□□ -0.941e-9■■■□□ 14.6
PRPF8Q6P2Q9 CSF3R-213ENST00000489551 787 ntTSL 1 (best)8.9□□□□□ -0.981e-9■■■□□ 14.6
PRPF8Q6P2Q9 CSF3R-202ENST00000361632 2847 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.061e-9■■■□□ 14.6
PRPF8Q6P2Q9 CSF3R-205ENST00000373106 3373 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.151e-9■■■□□ 14.6
PRPF8Q6P2Q9 CSF3R-203ENST00000373103 3454 ntTSL 1 (best) BASIC7.41□□□□□ -1.221e-9■■■□□ 14.6
PRPF8Q6P2Q9 CALM1-215ENST00000557123 569 ntTSL 315.72■□□□□ 0.118e-7■■■□□ 14.6
PRPF8Q6P2Q9 USP22-205ENST00000478443 1071 ntTSL 1 (best)12.48□□□□□ -0.411e-6■■■□□ 14.6
PRPF8Q6P2Q9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.11■□□□□ 0.651e-7■■■□□ 14.6
PRPF8Q6P2Q9 AKAP8L-203ENST00000594594 2251 ntTSL 516.62■□□□□ 0.251e-7■■■□□ 14.6
PRPF8Q6P2Q9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.011e-7■■■□□ 14.6
PRPF8Q6P2Q9 AKAP8L-220ENST00000609519 2113 ntTSL 215.05■□□□□ 01e-7■■■□□ 14.6
PRPF8Q6P2Q9 AKAP8L-202ENST00000593845 2749 ntTSL 213.9□□□□□ -0.181e-7■■■□□ 14.6
PRPF8Q6P2Q9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.25□□□□□ -0.297e-7■■■□□ 14.6
PRPF8Q6P2Q9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.02■□□□□ 0.483e-7■■■□□ 14.6
PRPF8Q6P2Q9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.323e-7■■■□□ 14.6
PRPF8Q6P2Q9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.49■□□□□ 0.233e-7■■■□□ 14.6
PRPF8Q6P2Q9 RPS15-211ENST00000592700 1602 ntTSL 215.19■□□□□ 0.023e-7■■■□□ 14.6
PRPF8Q6P2Q9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.74□□□□□ -0.053e-7■■■□□ 14.6
PRPF8Q6P2Q9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.52□□□□□ -0.253e-7■■■□□ 14.6
PRPF8Q6P2Q9 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.5□□□□□ -0.413e-7■■■□□ 14.6
PRPF8Q6P2Q9 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.5□□□□□ -0.413e-7■■■□□ 14.6
PRPF8Q6P2Q9 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.413e-7■■■□□ 14.6
PRPF8Q6P2Q9 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.5□□□□□ -0.413e-7■■■□□ 14.6
PRPF8Q6P2Q9 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.17□□□□□ -0.463e-7■■■□□ 14.6
PRPF8Q6P2Q9 TBCK-207ENST00000503516 601 ntTSL 30.39□□□□□ -2.355e-19■■■□□ 14.6
PRPF8Q6P2Q9 RABGAP1L-222ENST00000635248 3074 ntTSL 58.8□□□□□ -13e-6■■■□□ 14.6
PRPF8Q6P2Q9 RBM39-208ENST00000416108 577 ntTSL 46.92□□□□□ -1.39e-11■■■□□ 14.6
PRPF8Q6P2Q9 EPS15L1-213ENST00000599790 1921 ntTSL 516.64■□□□□ 0.253e-7■■■□□ 14.6
PRPF8Q6P2Q9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.024e-7■■■□□ 14.6
PRPF8Q6P2Q9 PTBP1-218ENST00000592804 742 ntTSL 216.57■□□□□ 0.245e-11■■■□□ 14.6
PRPF8Q6P2Q9 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.36□□□□□ -0.591e-6■■■□□ 14.6
PRPF8Q6P2Q9 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.36□□□□□ -0.591e-6■■■□□ 14.6
PRPF8Q6P2Q9 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC10.56□□□□□ -0.721e-6■■■□□ 14.6
PRPF8Q6P2Q9 ZFYVE27-203ENST00000359980 2997 ntAPPRIS ALT1 TSL 2 BASIC9.71□□□□□ -0.861e-6■■■□□ 14.6
PRPF8Q6P2Q9 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC9.64□□□□□ -0.871e-6■■■□□ 14.6
PRPF8Q6P2Q9 ZFYVE27-206ENST00000393677 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.911e-6■■■□□ 14.6
PRPF8Q6P2Q9 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC9.36□□□□□ -0.911e-6■■■□□ 14.6
PRPF8Q6P2Q9 CYBA-205ENST00000565588 221 ntTSL 29.1□□□□□ -0.957e-14■■■□□ 14.6
PRPF8Q6P2Q9 KMT2E-204ENST00000468607 558 ntTSL 20.49□□□□□ -2.331e-8■■■□□ 14.6
PRPF8Q6P2Q9 WDR59-214ENST00000568323 558 ntTSL 514.91□□□□□ -0.021e-7■■■□□ 14.6
PRPF8Q6P2Q9 WDR59-208ENST00000563111 583 ntTSL 49.4□□□□□ -0.91e-7■■■□□ 14.6
PRPF8Q6P2Q9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.29■□□□□ 0.524e-7■■■□□ 14.6
PRPF8Q6P2Q9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.63□□□□□ -0.074e-7■■■□□ 14.6
PRPF8Q6P2Q9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.59□□□□□ -0.234e-7■■■□□ 14.6
PRPF8Q6P2Q9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.51□□□□□ -0.254e-7■■■□□ 14.6
PRPF8Q6P2Q9 PGAP3-205ENST00000577337 587 ntTSL 312.9□□□□□ -0.344e-7■■■□□ 14.6
PRPF8Q6P2Q9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.354e-7■■■□□ 14.6
PRPF8Q6P2Q9 PGAP3-202ENST00000309862 3028 ntTSL 211.69□□□□□ -0.544e-7■■■□□ 14.6
PRPF8Q6P2Q9 TMEM173-212ENST00000514119 1114 ntTSL 315.03■□□□□ -02e-7■■■□□ 14.6
PRPF8Q6P2Q9 TMEM173-202ENST00000502362 560 ntTSL 314.56□□□□□ -0.082e-7■■■□□ 14.6
PRPF8Q6P2Q9 TMEM173-209ENST00000511850 890 ntTSL 514.5□□□□□ -0.092e-7■■■□□ 14.6
PRPF8Q6P2Q9 TMEM173-208ENST00000510817 901 ntTSL 212.23□□□□□ -0.452e-7■■■□□ 14.6
PRPF8Q6P2Q9 TMEM173-210ENST00000511886 826 ntTSL 512.06□□□□□ -0.482e-7■■■□□ 14.6
PRPF8Q6P2Q9 TMEM173-215ENST00000515507 707 ntTSL 411.67□□□□□ -0.542e-7■■■□□ 14.6
PRPF8Q6P2Q9 TMEM173-214ENST00000514542 628 ntTSL 211.31□□□□□ -0.62e-7■■■□□ 14.6
PRPF8Q6P2Q9 TMEM173-213ENST00000514348 705 ntTSL 310.83□□□□□ -0.682e-7■■■□□ 14.6
PRPF8Q6P2Q9 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.692e-7■■■□□ 14.6
PRPF8Q6P2Q9 TMEM173-206ENST00000507297 3200 ntTSL 28.86□□□□□ -0.992e-7■■■□□ 14.6
PRPF8Q6P2Q9 COQ9-207ENST00000564655 935 ntTSL 319.62■□□□□ 0.737e-7■■■□□ 14.6
PRPF8Q6P2Q9 COQ9-206ENST00000564115 845 ntTSL 518.55■□□□□ 0.567e-7■■■□□ 14.6
PRPF8Q6P2Q9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.45□□□□□ -0.17e-7■■■□□ 14.6
PRPF8Q6P2Q9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.117e-7■■■□□ 14.6
PRPF8Q6P2Q9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.7□□□□□ -0.227e-7■■■□□ 14.6
PRPF8Q6P2Q9 COQ9-204ENST00000563166 399 ntTSL 510.92□□□□□ -0.667e-7■■■□□ 14.6
PRPF8Q6P2Q9 TBCD-211ENST00000572984 682 ntTSL 59.22□□□□□ -0.939e-7■■■□□ 14.6
PRPF8Q6P2Q9 ARHGAP27-216ENST00000581638 537 ntTSL 417.86■□□□□ 0.451e-6■■■□□ 14.6
PRPF8Q6P2Q9 WWP2-210ENST00000567579 527 ntTSL 510.99□□□□□ -0.659e-8■■■□□ 14.6
PRPF8Q6P2Q9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.05■□□□□ 0.481e-8■■■□□ 14.6
PRPF8Q6P2Q9 POLR2F-212ENST00000492213 550 ntTSL 418.03■□□□□ 0.481e-8■■■□□ 14.6
PRPF8Q6P2Q9 POLR2F-206ENST00000443002 1890 ntTSL 216.67■□□□□ 0.261e-8■■■□□ 14.6
PRPF8Q6P2Q9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.141e-8■■■□□ 14.6
PRPF8Q6P2Q9 POLR2F-209ENST00000483713 615 ntTSL 313.05□□□□□ -0.321e-8■■■□□ 14.6
PRPF8Q6P2Q9 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.96□□□□□ -0.331e-8■■■□□ 14.6
PRPF8Q6P2Q9 POLR2F-210ENST00000484894 551 ntTSL 411.86□□□□□ -0.511e-8■■■□□ 14.6
PRPF8Q6P2Q9 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC10.98□□□□□ -0.651e-8■■■□□ 14.6
PRPF8Q6P2Q9 TMEM259-204ENST00000586285 626 ntTSL 310.13□□□□□ -0.794e-13■■■□□ 14.6
PRPF8Q6P2Q9 BLVRB-203ENST00000597870 1392 ntTSL 515.55■□□□□ 0.081e-6■■■□□ 14.6
PRPF8Q6P2Q9 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.311e-6■■■□□ 14.6
PRPF8Q6P2Q9 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC10.99□□□□□ -0.651e-6■■■□□ 14.6
PRPF8Q6P2Q9 BLVRB-204ENST00000601346 676 ntTSL 210.49□□□□□ -0.731e-6■■■□□ 14.6
PRPF8Q6P2Q9 ARHGEF10L-205ENST00000466782 482 ntTSL 39.15□□□□□ -0.942e-6■■■□□ 14.6
PRPF8Q6P2Q9 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC10.74□□□□□ -0.691e-6■■■□□ 14.6
PRPF8Q6P2Q9 MARS-223ENST00000551431 559 ntTSL 416.33■□□□□ 0.21e-6■■■□□ 14.6
PRPF8Q6P2Q9 AKAP8-205ENST00000599883 860 ntTSL 515.91■□□□□ 0.147e-7■■■□□ 14.6
PRPF8Q6P2Q9 HPS1-203ENST00000359632 978 ntTSL 311.69□□□□□ -0.544e-8■■■□□ 14.6
PRPF8Q6P2Q9 SEMA4G-209ENST00000519649 2024 ntTSL 511.62□□□□□ -0.558e-8■■■□□ 14.6
PRPF8Q6P2Q9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.86■□□□□ 0.452e-7■■□□□ 14.5
PRPF8Q6P2Q9 D2HGDH-202ENST00000400769 2277 ntTSL 217.38■□□□□ 0.372e-7■■□□□ 14.5
PRPF8Q6P2Q9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.052e-7■■□□□ 14.5
PRPF8Q6P2Q9 D2HGDH-206ENST00000436747 4549 ntTSL 1 (best)14.79□□□□□ -0.042e-7■■□□□ 14.5
PRPF8Q6P2Q9 PRDX2-205ENST00000478908 413 ntTSL 29.31□□□□□ -0.922e-7■■□□□ 14.5
PRPF8Q6P2Q9 PRDX2-206ENST00000498785 505 ntTSL 28.97□□□□□ -0.972e-7■■□□□ 14.5
PRPF8Q6P2Q9 ARHGEF16-207ENST00000485984 2340 ntTSL 213.1□□□□□ -0.311e-6■■□□□ 14.5
PRPF8Q6P2Q9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.05□□□□□ -0.483e-7■■□□□ 14.5
PRPF8Q6P2Q9 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.06□□□□□ -0.643e-7■■□□□ 14.5
Retrieved 100 of 73,762 protein–RNA pairs in 1615.5 ms