RNA–Protein interactions for RNA: ENST00000373106.5

CSF3R-205, Transcript of colony stimulating factor 3 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF3R, Length 3,373 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-205ENST00000373106 NISCHQ9Y2I1 1504 aa20.32■□□□□ 0.84
CSF3R-205ENST00000373106 PELP1Q8IZL8 1130 aaKnown RBP18.26■□□□□ 0.51
CSF3R-205ENST00000373106 HRCP23327 699 aa18.1■□□□□ 0.49
CSF3R-205ENST00000373106 PPARGC1BQ86YN6 1023 aaKnown RBP17.95■□□□□ 0.46
CSF3R-205ENST00000373106 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
CSF3R-205ENST00000373106 PCGF6Q9BYE7 350 aa17.69■□□□□ 0.42
CSF3R-205ENST00000373106 MYT1Q01538 1121 aa17.67■□□□□ 0.42
CSF3R-205ENST00000373106 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
CSF3R-205ENST00000373106 DCAF8L2P0C7V8 631 aa17.14■□□□□ 0.33
CSF3R-205ENST00000373106 SUPT5HO00267 1087 aaKnown RBP17.12■□□□□ 0.33
CSF3R-205ENST00000373106 ZCCHC6Q5VYS8 1495 aaKnown RBP17.11■□□□□ 0.33
CSF3R-205ENST00000373106 SHROOM4Q9ULL8 1493 aa16.96■□□□□ 0.31
CSF3R-205ENST00000373106 MYO15BQ96JP2 1530 aa16.94■□□□□ 0.3
CSF3R-205ENST00000373106 GTF3C3Q9Y5Q9 886 aa16.91■□□□□ 0.3
CSF3R-205ENST00000373106 ACIN1Q9UKV3 1341 aaKnown RBP16.89■□□□□ 0.29
CSF3R-205ENST00000373106 NEUROD1Q13562 356 aa16.88■□□□□ 0.29
CSF3R-205ENST00000373106 DCAF1Q9Y4B6 1507 aa16.87■□□□□ 0.29
CSF3R-205ENST00000373106 CHIC1Q5VXU3 224 aa16.75■□□□□ 0.27
CSF3R-205ENST00000373106 ZEB1P37275 1124 aaPredicted RBP16.74■□□□□ 0.27
CSF3R-205ENST00000373106 TRIM26Q12899 539 aaPredicted RBP16.74■□□□□ 0.27
CSF3R-205ENST00000373106 BCL11AQ9H165 835 aa16.68■□□□□ 0.26
CSF3R-205ENST00000373106 CENPBP07199 599 aaPredicted RBP16.67■□□□□ 0.26
CSF3R-205ENST00000373106 TTBK1Q5TCY1 1321 aaPredicted RBP16.64■□□□□ 0.25
CSF3R-205ENST00000373106 LOC105371045A0A1W2PR82 267 aa16.64■□□□□ 0.25
CSF3R-205ENST00000373106 ABCC9O60706 1549 aa16.64■□□□□ 0.25
CSF3R-205ENST00000373106 FAM9AQ8IZU1 332 aaPredicted RBP16.54■□□□□ 0.24
CSF3R-205ENST00000373106 NACADO15069 1562 aa16.49■□□□□ 0.23
CSF3R-205ENST00000373106 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
CSF3R-205ENST00000373106 PRKCSHP14314 528 aaPredicted RBP16.42■□□□□ 0.22
CSF3R-205ENST00000373106 DIEXFQ68CQ4 756 aaKnown RBP16.37■□□□□ 0.21
CSF3R-205ENST00000373106 UNC13AQ9UPW8 1703 aa16.33■□□□□ 0.21
CSF3R-205ENST00000373106 RB1CC1Q8TDY2 1594 aa16.32■□□□□ 0.2
CSF3R-205ENST00000373106 SCRIBQ14160 1630 aa16.27■□□□□ 0.2
CSF3R-205ENST00000373106 ANP32EQ9BTT0 268 aa16.24■□□□□ 0.19
CSF3R-205ENST00000373106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.2■□□□□ 0.18
CSF3R-205ENST00000373106 CCER1Q8TC90 406 aaPredicted RBP16.18■□□□□ 0.18
CSF3R-205ENST00000373106 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
CSF3R-205ENST00000373106 EHMT2Q96KQ7 1210 aa16.1■□□□□ 0.17
CSF3R-205ENST00000373106 BICRAQ9NZM4 1560 aa16.05■□□□□ 0.16
CSF3R-205ENST00000373106 ERICH6Q7L0X2 663 aa15.96■□□□□ 0.15
CSF3R-205ENST00000373106 TSHZ2Q9NRE2 1034 aa15.93■□□□□ 0.14
CSF3R-205ENST00000373106 MIER1Q8N108 512 aa15.9■□□□□ 0.14
CSF3R-205ENST00000373106 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
CSF3R-205ENST00000373106 SUPT16HQ9Y5B9 1047 aaKnown RBP15.84■□□□□ 0.13
CSF3R-205ENST00000373106 ZNF316A6NFI3 1004 aaPredicted RBP15.83■□□□□ 0.13
CSF3R-205ENST00000373106 CECR2Q9BXF3 1484 aa15.8■□□□□ 0.12
CSF3R-205ENST00000373106 BCANQ96GW7 911 aa15.73■□□□□ 0.11
CSF3R-205ENST00000373106 RSF1Q96T23 1441 aaPredicted RBP15.72■□□□□ 0.11
CSF3R-205ENST00000373106 MROH2BQ7Z745 1585 aa15.72■□□□□ 0.11
CSF3R-205ENST00000373106 SMARCA4P51532 1647 aa15.67■□□□□ 0.1
CSF3R-205ENST00000373106 ANO8Q9HCE9 1232 aaPredicted RBP15.66■□□□□ 0.1
CSF3R-205ENST00000373106 APLP2Q06481 763 aa15.66■□□□□ 0.1
CSF3R-205ENST00000373106 WIZO95785 1651 aa15.64■□□□□ 0.09
CSF3R-205ENST00000373106 BAZ1AQ9NRL2 1556 aaPredicted RBP15.64■□□□□ 0.09
CSF3R-205ENST00000373106 PABPN1Q86U42 306 aaKnown RBP eCLIP15.61■□□□□ 0.094e-7■■□□□ 12.2
CSF3R-205ENST00000373106 PEG3Q9GZU2 1588 aa15.57■□□□□ 0.08
CSF3R-205ENST00000373106 CLSPNQ9HAW4 1339 aa15.54■□□□□ 0.08
CSF3R-205ENST00000373106 RBM19Q9Y4C8 960 aaKnown RBP15.53■□□□□ 0.08
CSF3R-205ENST00000373106 CCDC136Q96JN2 1154 aa15.48■□□□□ 0.07
CSF3R-205ENST00000373106 FKBP8Q14318 412 aa15.44■□□□□ 0.06
CSF3R-205ENST00000373106 EIF4G1Q04637 1599 aaKnown RBP15.43■□□□□ 0.06
CSF3R-205ENST00000373106 ITGAEP38570 1179 aa15.42■□□□□ 0.06
CSF3R-205ENST00000373106 MSH5O43196 834 aa15.42■□□□□ 0.06
CSF3R-205ENST00000373106 SALL2Q9Y467 1007 aaPredicted RBP15.42■□□□□ 0.06
CSF3R-205ENST00000373106 TOP2AP11388 1531 aaKnown RBP15.41■□□□□ 0.06
CSF3R-205ENST00000373106 DEKP35659 375 aaKnown RBP15.41■□□□□ 0.06
CSF3R-205ENST00000373106 ATAD2BQ9ULI0 1458 aa15.34■□□□□ 0.05
CSF3R-205ENST00000373106 SMARCA2P51531 1590 aa15.32■□□□□ 0.04
CSF3R-205ENST00000373106 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.31■□□□□ 0.04
CSF3R-205ENST00000373106 NEFLP07196 543 aa15.3■□□□□ 0.04
CSF3R-205ENST00000373106 HNRNPUL2Q1KMD3 747 aaKnown RBP15.28■□□□□ 0.04
CSF3R-205ENST00000373106 RTN4Q9NQC3 1192 aaKnown RBP15.27■□□□□ 0.04
CSF3R-205ENST00000373106 HMGXB3Q12766 1538 aa15.24■□□□□ 0.03
CSF3R-205ENST00000373106 NBR1Q14596 966 aa15.24■□□□□ 0.03
CSF3R-205ENST00000373106 CCDC88BA6NC98 1476 aa15.23■□□□□ 0.03
CSF3R-205ENST00000373106 KCNH8Q96L42 1107 aa15.22■□□□□ 0.03
CSF3R-205ENST00000373106 CC2D2AQ9P2K1 1620 aa15.22■□□□□ 0.03
CSF3R-205ENST00000373106 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
CSF3R-205ENST00000373106 MYT1LQ9UL68 1186 aa15.17■□□□□ 0.02
CSF3R-205ENST00000373106 UBE2Q2Q8WVN8 375 aa15.16■□□□□ 0.02
CSF3R-205ENST00000373106 BAZ1BQ9UIG0 1483 aaKnown RBP15.16■□□□□ 0.02
CSF3R-205ENST00000373106 IL27Q8NEV9 243 aa15.12■□□□□ 0.01
CSF3R-205ENST00000373106 EIF5BO60841 1220 aaKnown RBP15.1■□□□□ 0.01
CSF3R-205ENST00000373106 FANCIQ9NVI1 1328 aa15.09■□□□□ 0.01
CSF3R-205ENST00000373106 CDK11AQ9UQ88 783 aaPredicted RBP15.09■□□□□ 0.01
CSF3R-205ENST00000373106 ERICH6BQ5W0A0 696 aa15.07■□□□□ 0
CSF3R-205ENST00000373106 TRIM52Q96A61 297 aa15.05■□□□□ -0
CSF3R-205ENST00000373106 IRX6P78412 446 aaPredicted RBP15.04■□□□□ -0
CSF3R-205ENST00000373106 PRDM2Q13029 1718 aa15.01□□□□□ -0.01
CSF3R-205ENST00000373106 RTL5Q5HYW3 569 aaPredicted RBP15□□□□□ -0.01
CSF3R-205ENST00000373106 PKNOX2Q96KN3 472 aa14.93□□□□□ -0.02
CSF3R-205ENST00000373106 NOP58Q9Y2X3 529 aaKnown RBP14.93□□□□□ -0.02
CSF3R-205ENST00000373106 RANGAP1P46060 587 aaPredicted RBP14.93□□□□□ -0.02
CSF3R-205ENST00000373106 ABCC8Q09428 1581 aa14.92□□□□□ -0.02
CSF3R-205ENST00000373106 PAK3O75914 559 aaPredicted RBP14.91□□□□□ -0.02
CSF3R-205ENST00000373106 CFTRP13569 1480 aa14.88□□□□□ -0.03
CSF3R-205ENST00000373106 DDX10Q13206 875 aaKnown RBP14.87□□□□□ -0.03
CSF3R-205ENST00000373106 UBTFP17480 764 aaKnown RBP14.86□□□□□ -0.03
CSF3R-205ENST00000373106 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
CSF3R-205ENST00000373106 SYNJ1O43426 1573 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms