RNA–Protein interactions for RNA: ENST00000507297.5

TMEM173-206, Transcript of transmembrane protein 173, humanhuman

TSL 2

Gene TMEM173, Length 3,200 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-206ENST00000507297 NISCHQ9Y2I1 1504 aa25.2■■□□□ 1.63
TMEM173-206ENST00000507297 CCDC180Q9P1Z9 1646 aa21.56■■□□□ 1.04
TMEM173-206ENST00000507297 SHROOM4Q9ULL8 1493 aa21.38■■□□□ 1.01
TMEM173-206ENST00000507297 ZCCHC6Q5VYS8 1495 aaKnown RBP21.35■■□□□ 1.01
TMEM173-206ENST00000507297 SUPT5HO00267 1087 aaKnown RBP20.9■□□□□ 0.94
TMEM173-206ENST00000507297 DCAF1Q9Y4B6 1507 aa20.78■□□□□ 0.92
TMEM173-206ENST00000507297 DCAF8L2P0C7V8 631 aa20.66■□□□□ 0.9
TMEM173-206ENST00000507297 MYO15BQ96JP2 1530 aa20.44■□□□□ 0.86
TMEM173-206ENST00000507297 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.85
TMEM173-206ENST00000507297 ABCC9O60706 1549 aa20.19■□□□□ 0.82
TMEM173-206ENST00000507297 SCRIBQ14160 1630 aa20.11■□□□□ 0.81
TMEM173-206ENST00000507297 RSF1Q96T23 1441 aaPredicted RBP19.92■□□□□ 0.78
TMEM173-206ENST00000507297 NACADO15069 1562 aa19.83■□□□□ 0.76
TMEM173-206ENST00000507297 RB1CC1Q8TDY2 1594 aa19.78■□□□□ 0.76
TMEM173-206ENST00000507297 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
TMEM173-206ENST00000507297 HRCP23327 699 aa19.75■□□□□ 0.75
TMEM173-206ENST00000507297 PCGF6Q9BYE7 350 aa19.7■□□□□ 0.74
TMEM173-206ENST00000507297 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
TMEM173-206ENST00000507297 MROH2BQ7Z745 1585 aa19.6■□□□□ 0.73
TMEM173-206ENST00000507297 WIZO95785 1651 aa19.54■□□□□ 0.72
TMEM173-206ENST00000507297 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
TMEM173-206ENST00000507297 BAZ1AQ9NRL2 1556 aaPredicted RBP19.43■□□□□ 0.7
TMEM173-206ENST00000507297 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
TMEM173-206ENST00000507297 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.69
TMEM173-206ENST00000507297 PPARGC1BQ86YN6 1023 aaKnown RBP19.35■□□□□ 0.69
TMEM173-206ENST00000507297 TRIM26Q12899 539 aaPredicted RBP19.35■□□□□ 0.69
TMEM173-206ENST00000507297 FAM9AQ8IZU1 332 aaPredicted RBP19.3■□□□□ 0.68
TMEM173-206ENST00000507297 SMARCA4P51532 1647 aa19.24■□□□□ 0.67
TMEM173-206ENST00000507297 TOP2AP11388 1531 aaKnown RBP19.21■□□□□ 0.67
TMEM173-206ENST00000507297 EHMT2Q96KQ7 1210 aa19.12■□□□□ 0.65
TMEM173-206ENST00000507297 SMARCA2P51531 1590 aa19.12■□□□□ 0.65
TMEM173-206ENST00000507297 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
TMEM173-206ENST00000507297 ABCC8Q09428 1581 aa19.07■□□□□ 0.64
TMEM173-206ENST00000507297 BICRAQ9NZM4 1560 aa19.07■□□□□ 0.64
TMEM173-206ENST00000507297 PEG3Q9GZU2 1588 aa18.94■□□□□ 0.62
TMEM173-206ENST00000507297 ZEB1P37275 1124 aaPredicted RBP18.88■□□□□ 0.61
TMEM173-206ENST00000507297 PABPN1Q86U42 306 aaKnown RBP eCLIP18.86■□□□□ 0.61
TMEM173-206ENST00000507297 SOGA1O94964 1423 aa18.84■□□□□ 0.61
TMEM173-206ENST00000507297 RUSC2Q8N2Y8 1516 aa18.77■□□□□ 0.6
TMEM173-206ENST00000507297 WRNQ14191 1432 aaPredicted RBP eCLIP18.75■□□□□ 0.59
TMEM173-206ENST00000507297 CEP162Q5TB80 1403 aa18.74■□□□□ 0.59
TMEM173-206ENST00000507297 EEA1Q15075 1411 aa18.72■□□□□ 0.59
TMEM173-206ENST00000507297 TNIKQ9UKE5 1360 aa18.7■□□□□ 0.58
TMEM173-206ENST00000507297 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
TMEM173-206ENST00000507297 SYNJ1O43426 1573 aa18.69■□□□□ 0.58
TMEM173-206ENST00000507297 ATAD2BQ9ULI0 1458 aa18.68■□□□□ 0.58
TMEM173-206ENST00000507297 CSRNP3Q8WYN3 585 aa18.64■□□□□ 0.57
TMEM173-206ENST00000507297 GOLGA3Q08378 1498 aa18.61■□□□□ 0.57
TMEM173-206ENST00000507297 BAZ1BQ9UIG0 1483 aaKnown RBP18.61■□□□□ 0.57
TMEM173-206ENST00000507297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.57■□□□□ 0.56
TMEM173-206ENST00000507297 KIF21BO75037 1637 aa18.57■□□□□ 0.56
TMEM173-206ENST00000507297 UBTFP17480 764 aaKnown RBP18.52■□□□□ 0.55
TMEM173-206ENST00000507297 TTBK1Q5TCY1 1321 aaPredicted RBP18.52■□□□□ 0.55
TMEM173-206ENST00000507297 CEP164Q9UPV0 1460 aa18.51■□□□□ 0.55
TMEM173-206ENST00000507297 CCER1Q8TC90 406 aaPredicted RBP18.48■□□□□ 0.55
TMEM173-206ENST00000507297 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
TMEM173-206ENST00000507297 BIVM-ERCC5R4GMW8 1640 aa18.44■□□□□ 0.54
TMEM173-206ENST00000507297 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.53
TMEM173-206ENST00000507297 HMGXB3Q12766 1538 aa18.38■□□□□ 0.53
TMEM173-206ENST00000507297 CLIP1P30622 1438 aa18.37■□□□□ 0.53
TMEM173-206ENST00000507297 NCAPD3P42695 1498 aa18.32■□□□□ 0.52
TMEM173-206ENST00000507297 VPS8Q8N3P4 1428 aa18.32■□□□□ 0.52
TMEM173-206ENST00000507297 CUX1P39880 1505 aa18.26■□□□□ 0.51
TMEM173-206ENST00000507297 ERICH3Q5RHP9 1530 aa18.24■□□□□ 0.51
TMEM173-206ENST00000507297 PRXQ9BXM0 1461 aa18.23■□□□□ 0.51
TMEM173-206ENST00000507297 PRDM2Q13029 1718 aa18.22■□□□□ 0.51
TMEM173-206ENST00000507297 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
TMEM173-206ENST00000507297 MYT1Q01538 1121 aa18.21■□□□□ 0.51
TMEM173-206ENST00000507297 CFTRP13569 1480 aa18.17■□□□□ 0.5
TMEM173-206ENST00000507297 ARAP1Q96P48 1450 aa18.16■□□□□ 0.5
TMEM173-206ENST00000507297 RANGAP1P46060 587 aaPredicted RBP18.15■□□□□ 0.5
TMEM173-206ENST00000507297 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
TMEM173-206ENST00000507297 HNRNPUL2Q1KMD3 747 aaKnown RBP18.13■□□□□ 0.49
TMEM173-206ENST00000507297 KIF27Q86VH2 1401 aa18.08■□□□□ 0.48
TMEM173-206ENST00000507297 APLP2Q06481 763 aa18.06■□□□□ 0.48
TMEM173-206ENST00000507297 ZNF316A6NFI3 1004 aaPredicted RBP18.02■□□□□ 0.48
TMEM173-206ENST00000507297 ACIN1Q9UKV3 1341 aaKnown RBP18.01■□□□□ 0.47
TMEM173-206ENST00000507297 NEUROD1Q13562 356 aa18■□□□□ 0.47
TMEM173-206ENST00000507297 ARHGAP35Q9NRY4 1499 aa17.98■□□□□ 0.47
TMEM173-206ENST00000507297 KANK4Q5T7N3 995 aaPredicted RBP17.97■□□□□ 0.47
TMEM173-206ENST00000507297 CUX2O14529 1486 aa17.92■□□□□ 0.46
TMEM173-206ENST00000507297 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
TMEM173-206ENST00000507297 RRBP1Q9P2E9 1410 aaKnown RBP17.92■□□□□ 0.46
TMEM173-206ENST00000507297 IGF1RP08069 1367 aa17.9■□□□□ 0.46
TMEM173-206ENST00000507297 FGD5Q6ZNL6 1462 aa17.9■□□□□ 0.46
TMEM173-206ENST00000507297 CC2D2AQ9P2K1 1620 aa17.9■□□□□ 0.46
TMEM173-206ENST00000507297 DHX57Q6P158 1386 aaKnown RBP17.88■□□□□ 0.45
TMEM173-206ENST00000507297 CENPBP07199 599 aaPredicted RBP17.84■□□□□ 0.45
TMEM173-206ENST00000507297 TIAM1Q13009 1591 aa17.81■□□□□ 0.44
TMEM173-206ENST00000507297 CLSPNQ9HAW4 1339 aa17.8■□□□□ 0.44
TMEM173-206ENST00000507297 CARMIL1Q5VZK9 1371 aa17.8■□□□□ 0.44
TMEM173-206ENST00000507297 GTF3C3Q9Y5Q9 886 aa17.79■□□□□ 0.44
TMEM173-206ENST00000507297 CCNB3Q8WWL7 1395 aa17.78■□□□□ 0.44
TMEM173-206ENST00000507297 MIER1Q8N108 512 aa17.78■□□□□ 0.44
TMEM173-206ENST00000507297 FANCD2Q9BXW9 1451 aa17.78■□□□□ 0.44
TMEM173-206ENST00000507297 MAP3K1Q13233 1512 aa17.78■□□□□ 0.44
TMEM173-206ENST00000507297 DNMBPQ6XZF7 1577 aa17.75■□□□□ 0.43
TMEM173-206ENST00000507297 CFAP43Q8NDM7 1665 aa17.75■□□□□ 0.43
TMEM173-206ENST00000507297 PCF11O94913 1555 aaKnown RBP17.72■□□□□ 0.43
TMEM173-206ENST00000507297 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms