RNA–Protein interactions for RNA: ENST00000478443.1

USP22-205, Transcript of ubiquitin specific peptidase 22, humanhuman

TSL 1 (best)

Gene USP22, Length 1,071 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-205ENST00000478443 NISCHQ9Y2I1 1504 aa35.42■■■■□ 3.26
USP22-205ENST00000478443 CCDC180Q9P1Z9 1646 aa31.46■■■□□ 2.63
USP22-205ENST00000478443 ABCC9O60706 1549 aa30.69■■■□□ 2.5
USP22-205ENST00000478443 DCAF8L2P0C7V8 631 aa29.73■■■□□ 2.35
USP22-205ENST00000478443 RB1CC1Q8TDY2 1594 aa29.62■■■□□ 2.33
USP22-205ENST00000478443 NACADO15069 1562 aa29.61■■■□□ 2.33
USP22-205ENST00000478443 ZCCHC6Q5VYS8 1495 aaKnown RBP29.49■■■□□ 2.31
USP22-205ENST00000478443 MYO15BQ96JP2 1530 aa29.45■■■□□ 2.31
USP22-205ENST00000478443 DCAF1Q9Y4B6 1507 aa29.35■■■□□ 2.29
USP22-205ENST00000478443 UNC13AQ9UPW8 1703 aa28.77■■■□□ 2.2
USP22-205ENST00000478443 PABPN1Q86U42 306 aaKnown RBP eCLIP28.73■■■□□ 2.19
USP22-205ENST00000478443 SCRIBQ14160 1630 aa28.68■■■□□ 2.18
USP22-205ENST00000478443 BICRAQ9NZM4 1560 aa28.57■■■□□ 2.16
USP22-205ENST00000478443 SHROOM4Q9ULL8 1493 aa28.46■■■□□ 2.15
USP22-205ENST00000478443 DNAJC5BQ9UF47 199 aa28.01■■■□□ 2.07
USP22-205ENST00000478443 EIF4G1Q04637 1599 aaKnown RBP27.89■■■□□ 2.05
USP22-205ENST00000478443 CC2D2AQ9P2K1 1620 aa27.74■■■□□ 2.03
USP22-205ENST00000478443 CECR2Q9BXF3 1484 aa27.61■■■□□ 2.01
USP22-205ENST00000478443 BAZ1AQ9NRL2 1556 aaPredicted RBP27.5■■□□□ 1.99
USP22-205ENST00000478443 SMARCA4P51532 1647 aa27.45■■□□□ 1.98
USP22-205ENST00000478443 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
USP22-205ENST00000478443 NCAPD3P42695 1498 aa27.3■■□□□ 1.96
USP22-205ENST00000478443 ATAD2BQ9ULI0 1458 aa27.3■■□□□ 1.96
USP22-205ENST00000478443 MROH2BQ7Z745 1585 aa27.25■■□□□ 1.95
USP22-205ENST00000478443 PEG3Q9GZU2 1588 aa27.18■■□□□ 1.94
USP22-205ENST00000478443 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
USP22-205ENST00000478443 BAZ1BQ9UIG0 1483 aaKnown RBP27.14■■□□□ 1.94
USP22-205ENST00000478443 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
USP22-205ENST00000478443 WIZO95785 1651 aa26.95■■□□□ 1.91
USP22-205ENST00000478443 TOP2AP11388 1531 aaKnown RBP26.73■■□□□ 1.87
USP22-205ENST00000478443 LAMC3Q9Y6N6 1575 aa26.58■■□□□ 1.85
USP22-205ENST00000478443 ERCC6Q03468 1493 aa26.56■■□□□ 1.84
USP22-205ENST00000478443 CADPSQ9ULU8 1353 aa26.55■■□□□ 1.84
USP22-205ENST00000478443 NESP48681 1621 aa26.52■■□□□ 1.84
USP22-205ENST00000478443 SUPT5HO00267 1087 aaKnown RBP26.51■■□□□ 1.83
USP22-205ENST00000478443 PDS5BQ9NTI5 1447 aa26.48■■□□□ 1.83
USP22-205ENST00000478443 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
USP22-205ENST00000478443 CFTRP13569 1480 aa26.36■■□□□ 1.81
USP22-205ENST00000478443 FANCD2Q9BXW9 1451 aa26.21■■□□□ 1.79
USP22-205ENST00000478443 KIF21AQ7Z4S6 1674 aa26.21■■□□□ 1.79
USP22-205ENST00000478443 CUX2O14529 1486 aa26.2■■□□□ 1.78
USP22-205ENST00000478443 CEP164Q9UPV0 1460 aa26.19■■□□□ 1.78
USP22-205ENST00000478443 MRC2Q9UBG0 1479 aa26.12■■□□□ 1.77
USP22-205ENST00000478443 PRDM2Q13029 1718 aa26.12■■□□□ 1.77
USP22-205ENST00000478443 THOC2Q8NI27 1593 aaKnown RBP26.09■■□□□ 1.77
USP22-205ENST00000478443 WDR62O43379 1518 aa25.98■■□□□ 1.75
USP22-205ENST00000478443 ABCC8Q09428 1581 aa25.91■■□□□ 1.74
USP22-205ENST00000478443 URB2Q14146 1524 aaKnown RBP25.87■■□□□ 1.73
USP22-205ENST00000478443 TOPBP1Q92547 1522 aa25.77■■□□□ 1.72
USP22-205ENST00000478443 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
USP22-205ENST00000478443 IFT140Q96RY7 1462 aa25.66■■□□□ 1.7
USP22-205ENST00000478443 CUX1P39880 1505 aa25.57■■□□□ 1.68
USP22-205ENST00000478443 POLA1P09884 1462 aaPredicted RBP25.55■■□□□ 1.68
USP22-205ENST00000478443 WRNQ14191 1432 aaPredicted RBP eCLIP25.54■■□□□ 1.68
USP22-205ENST00000478443 SOGA1O94964 1423 aa25.53■■□□□ 1.68
USP22-205ENST00000478443 FGD5Q6ZNL6 1462 aa25.51■■□□□ 1.67
USP22-205ENST00000478443 TARBP1Q13395 1621 aaKnown RBP25.43■■□□□ 1.66
USP22-205ENST00000478443 RAD54L2Q9Y4B4 1467 aa25.42■■□□□ 1.66
USP22-205ENST00000478443 ZNF608Q9ULD9 1512 aaPredicted RBP25.42■■□□□ 1.66
USP22-205ENST00000478443 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
USP22-205ENST00000478443 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
USP22-205ENST00000478443 WDR97A6NE52 1622 aa25.36■■□□□ 1.65
USP22-205ENST00000478443 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
USP22-205ENST00000478443 AQRO60306 1485 aaKnown RBP eCLIP25.34■■□□□ 1.659e-9■■■■■ 30
USP22-205ENST00000478443 TDRD9Q8NDG6 1382 aaKnown RBP25.33■■□□□ 1.65
USP22-205ENST00000478443 EIF4G3O43432 1585 aaKnown RBP25.33■■□□□ 1.65
USP22-205ENST00000478443 DNAJC5Q9H3Z4 198 aa25.3■■□□□ 1.64
USP22-205ENST00000478443 ABCA10Q8WWZ4 1543 aa25.29■■□□□ 1.64
USP22-205ENST00000478443 OSCARQ8IYS5 282 aa25.23■■□□□ 1.63
USP22-205ENST00000478443 GAPVD1Q14C86 1478 aa25.22■■□□□ 1.63
USP22-205ENST00000478443 GRIN2BQ13224 1484 aa25.21■■□□□ 1.63
USP22-205ENST00000478443 FBLN2P98095 1184 aa25.16■■□□□ 1.62
USP22-205ENST00000478443 MAGI1Q96QZ7 1491 aaPredicted RBP25.15■■□□□ 1.62
USP22-205ENST00000478443 CHMP7Q8WUX9 453 aaPredicted RBP25.12■■□□□ 1.61
USP22-205ENST00000478443 ABCA5Q8WWZ7 1642 aa25.12■■□□□ 1.61
USP22-205ENST00000478443 SNAPC4Q5SXM2 1469 aa25.11■■□□□ 1.61
USP22-205ENST00000478443 TRIM41Q8WV44 630 aa25.1■■□□□ 1.61
USP22-205ENST00000478443 PBRM1Q86U86 1689 aa25.07■■□□□ 1.6
USP22-205ENST00000478443 KIF27Q86VH2 1401 aa25.05■■□□□ 1.6
USP22-205ENST00000478443 SYNJ2O15056 1496 aa25.02■■□□□ 1.6
USP22-205ENST00000478443 ERICH3Q5RHP9 1530 aa25.02■■□□□ 1.6
USP22-205ENST00000478443 CHD1O14646 1710 aa24.98■■□□□ 1.59
USP22-205ENST00000478443 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.58
USP22-205ENST00000478443 ADAMTS12P58397 1594 aa24.88■■□□□ 1.57
USP22-205ENST00000478443 IGF1RP08069 1367 aa24.86■■□□□ 1.57
USP22-205ENST00000478443 GRIN2AQ12879 1464 aa24.85■■□□□ 1.57
USP22-205ENST00000478443 CUL7Q14999 1698 aa24.8■■□□□ 1.56
USP22-205ENST00000478443 CARMIL1Q5VZK9 1371 aa24.77■■□□□ 1.56
USP22-205ENST00000478443 CHIC1Q5VXU3 224 aa24.74■■□□□ 1.55
USP22-205ENST00000478443 NUP160Q12769 1436 aa24.72■■□□□ 1.55
USP22-205ENST00000478443 CLASP1Q7Z460 1538 aa24.71■■□□□ 1.55
USP22-205ENST00000478443 ARHGEF11O15085 1522 aa24.66■■□□□ 1.54
USP22-205ENST00000478443 EEA1Q15075 1411 aa24.66■■□□□ 1.54
USP22-205ENST00000478443 RUSC2Q8N2Y8 1516 aa24.66■■□□□ 1.54
USP22-205ENST00000478443 CEP170Q5SW79 1584 aa24.64■■□□□ 1.54
USP22-205ENST00000478443 RIMBP3CA6NJZ7 1639 aa24.63■■□□□ 1.53
USP22-205ENST00000478443 RIMBP3BA6NNM3 1639 aa24.63■■□□□ 1.53
USP22-205ENST00000478443 RIMBP3Q9UFD9 1639 aa24.63■■□□□ 1.53
USP22-205ENST00000478443 RAPGEF2Q9Y4G8 1499 aa24.62■■□□□ 1.53
USP22-205ENST00000478443 CSRNP3Q8WYN3 585 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms