RNA–Protein interactions for RNA: ENST00000565588.5

CYBA-205, Transcript of cytochrome b-245 alpha chain, humanhuman

TSL 2

Gene CYBA, Length 221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYBA-205ENST00000565588 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.81
CYBA-205ENST00000565588 CCDC180Q9P1Z9 1646 aa23.28■■□□□ 1.32
CYBA-205ENST00000565588 ABCC9O60706 1549 aa22.96■■□□□ 1.27
CYBA-205ENST00000565588 DCAF8L2P0C7V8 631 aa22.24■■□□□ 1.15
CYBA-205ENST00000565588 NACADO15069 1562 aa22.07■■□□□ 1.12
CYBA-205ENST00000565588 RB1CC1Q8TDY2 1594 aa22.05■■□□□ 1.12
CYBA-205ENST00000565588 MYO15BQ96JP2 1530 aa22■■□□□ 1.11
CYBA-205ENST00000565588 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
CYBA-205ENST00000565588 DCAF1Q9Y4B6 1507 aa21.86■■□□□ 1.09
CYBA-205ENST00000565588 PABPN1Q86U42 306 aaKnown RBP eCLIP21.58■■□□□ 1.05
CYBA-205ENST00000565588 BICRAQ9NZM4 1560 aa21.32■■□□□ 1
CYBA-205ENST00000565588 SCRIBQ14160 1630 aa21.25■□□□□ 0.99
CYBA-205ENST00000565588 SHROOM4Q9ULL8 1493 aa21.24■□□□□ 0.99
CYBA-205ENST00000565588 UNC13AQ9UPW8 1703 aa21.24■□□□□ 0.99
CYBA-205ENST00000565588 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
CYBA-205ENST00000565588 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
CYBA-205ENST00000565588 CC2D2AQ9P2K1 1620 aa20.68■□□□□ 0.9
CYBA-205ENST00000565588 CECR2Q9BXF3 1484 aa20.68■□□□□ 0.9
CYBA-205ENST00000565588 NCAPD3P42695 1498 aa20.47■□□□□ 0.87
CYBA-205ENST00000565588 BAZ1AQ9NRL2 1556 aaPredicted RBP20.43■□□□□ 0.86
CYBA-205ENST00000565588 ATAD2BQ9ULI0 1458 aa20.41■□□□□ 0.86
CYBA-205ENST00000565588 SMARCA4P51532 1647 aa20.36■□□□□ 0.85
CYBA-205ENST00000565588 SMARCA2P51531 1590 aa20.34■□□□□ 0.85
CYBA-205ENST00000565588 MROH2BQ7Z745 1585 aa20.29■□□□□ 0.84
CYBA-205ENST00000565588 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
CYBA-205ENST00000565588 HMGXB3Q12766 1538 aa20.21■□□□□ 0.83
CYBA-205ENST00000565588 BAZ1BQ9UIG0 1483 aaKnown RBP20.2■□□□□ 0.82
CYBA-205ENST00000565588 RSF1Q96T23 1441 aaPredicted RBP20.16■□□□□ 0.82
CYBA-205ENST00000565588 WIZO95785 1651 aa19.96■□□□□ 0.79
CYBA-205ENST00000565588 CADPSQ9ULU8 1353 aa19.89■□□□□ 0.77
CYBA-205ENST00000565588 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.77
CYBA-205ENST00000565588 NESP48681 1621 aa19.83■□□□□ 0.76
CYBA-205ENST00000565588 ERCC6Q03468 1493 aa19.82■□□□□ 0.76
CYBA-205ENST00000565588 PDS5BQ9NTI5 1447 aa19.81■□□□□ 0.76
CYBA-205ENST00000565588 LAMC3Q9Y6N6 1575 aa19.78■□□□□ 0.76
CYBA-205ENST00000565588 CFTRP13569 1480 aa19.71■□□□□ 0.75
CYBA-205ENST00000565588 CCDC88BA6NC98 1476 aa19.69■□□□□ 0.74
CYBA-205ENST00000565588 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
CYBA-205ENST00000565588 CUX2O14529 1486 aa19.64■□□□□ 0.73
CYBA-205ENST00000565588 FANCD2Q9BXW9 1451 aa19.55■□□□□ 0.72
CYBA-205ENST00000565588 CEP164Q9UPV0 1460 aa19.51■□□□□ 0.71
CYBA-205ENST00000565588 MRC2Q9UBG0 1479 aa19.49■□□□□ 0.71
CYBA-205ENST00000565588 THOC2Q8NI27 1593 aaKnown RBP19.41■□□□□ 0.7
CYBA-205ENST00000565588 KIF21AQ7Z4S6 1674 aa19.4■□□□□ 0.7
CYBA-205ENST00000565588 WDR62O43379 1518 aa19.37■□□□□ 0.69
CYBA-205ENST00000565588 ABCC8Q09428 1581 aa19.32■□□□□ 0.68
CYBA-205ENST00000565588 URB2Q14146 1524 aaKnown RBP19.31■□□□□ 0.68
CYBA-205ENST00000565588 DNAJC5Q9H3Z4 198 aa19.23■□□□□ 0.67
CYBA-205ENST00000565588 TOPBP1Q92547 1522 aa19.2■□□□□ 0.66
CYBA-205ENST00000565588 IFT140Q96RY7 1462 aa19.16■□□□□ 0.66
CYBA-205ENST00000565588 PRDM2Q13029 1718 aa19.15■□□□□ 0.66
CYBA-205ENST00000565588 DNMBPQ6XZF7 1577 aa19.14■□□□□ 0.65
CYBA-205ENST00000565588 SOGA1O94964 1423 aa19.08■□□□□ 0.65
CYBA-205ENST00000565588 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
CYBA-205ENST00000565588 CUX1P39880 1505 aa19.02■□□□□ 0.64
CYBA-205ENST00000565588 OSCARQ8IYS5 282 aa19.01■□□□□ 0.63
CYBA-205ENST00000565588 ZNF608Q9ULD9 1512 aaPredicted RBP19■□□□□ 0.63
CYBA-205ENST00000565588 WRNQ14191 1432 aaPredicted RBP eCLIP19■□□□□ 0.63
CYBA-205ENST00000565588 FGD5Q6ZNL6 1462 aa18.98■□□□□ 0.63
CYBA-205ENST00000565588 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
CYBA-205ENST00000565588 AQRO60306 1485 aaKnown RBP eCLIP18.97■□□□□ 0.635e-14■■■■■ 46.5
CYBA-205ENST00000565588 TDRD9Q8NDG6 1382 aaKnown RBP18.96■□□□□ 0.63
CYBA-205ENST00000565588 TARBP1Q13395 1621 aaKnown RBP18.92■□□□□ 0.62
CYBA-205ENST00000565588 ABCA10Q8WWZ4 1543 aa18.84■□□□□ 0.61
CYBA-205ENST00000565588 TOP2BQ02880 1626 aa18.83■□□□□ 0.61
CYBA-205ENST00000565588 FBLN2P98095 1184 aa18.83■□□□□ 0.6
CYBA-205ENST00000565588 CHMP7Q8WUX9 453 aaPredicted RBP18.82■□□□□ 0.6
CYBA-205ENST00000565588 GRIN2BQ13224 1484 aa18.82■□□□□ 0.6
CYBA-205ENST00000565588 WDR97A6NE52 1622 aa18.82■□□□□ 0.6
CYBA-205ENST00000565588 GAPVD1Q14C86 1478 aa18.8■□□□□ 0.6
CYBA-205ENST00000565588 EIF4G3O43432 1585 aaKnown RBP18.79■□□□□ 0.6
CYBA-205ENST00000565588 SYNJ1O43426 1573 aa18.77■□□□□ 0.6
CYBA-205ENST00000565588 BIVM-ERCC5R4GMW8 1640 aa18.75■□□□□ 0.59
CYBA-205ENST00000565588 MAGI1Q96QZ7 1491 aaPredicted RBP18.74■□□□□ 0.59
CYBA-205ENST00000565588 SNAPC4Q5SXM2 1469 aa18.71■□□□□ 0.59
CYBA-205ENST00000565588 SYNJ2O15056 1496 aa18.67■□□□□ 0.58
CYBA-205ENST00000565588 TRIM41Q8WV44 630 aa18.67■□□□□ 0.58
CYBA-205ENST00000565588 KIF27Q86VH2 1401 aa18.65■□□□□ 0.58
CYBA-205ENST00000565588 IGF1RP08069 1367 aa18.63■□□□□ 0.57
CYBA-205ENST00000565588 FHAD1B1AJZ9 1412 aa18.62■□□□□ 0.57
CYBA-205ENST00000565588 ABCA5Q8WWZ7 1642 aa18.62■□□□□ 0.57
CYBA-205ENST00000565588 ERICH3Q5RHP9 1530 aa18.6■□□□□ 0.57
CYBA-205ENST00000565588 GRIN2AQ12879 1464 aa18.52■□□□□ 0.56
CYBA-205ENST00000565588 CARMIL1Q5VZK9 1371 aa18.49■□□□□ 0.55
CYBA-205ENST00000565588 CYB5RLQ6IPT4 315 aa18.48■□□□□ 0.55
CYBA-205ENST00000565588 NUP160Q12769 1436 aa18.48■□□□□ 0.55
CYBA-205ENST00000565588 PBRM1Q86U86 1689 aa18.47■□□□□ 0.55
CYBA-205ENST00000565588 CHD1O14646 1710 aa18.46■□□□□ 0.55
CYBA-205ENST00000565588 ARHGEF11O15085 1522 aa18.45■□□□□ 0.54
CYBA-205ENST00000565588 JPH4Q96JJ6 628 aa18.45■□□□□ 0.54
CYBA-205ENST00000565588 ADAMTS12P58397 1594 aa18.44■□□□□ 0.54
CYBA-205ENST00000565588 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
CYBA-205ENST00000565588 CHIC1Q5VXU3 224 aa18.4■□□□□ 0.54
CYBA-205ENST00000565588 RIMBP3CA6NJZ7 1639 aa18.36■□□□□ 0.53
CYBA-205ENST00000565588 RIMBP3BA6NNM3 1639 aa18.36■□□□□ 0.53
CYBA-205ENST00000565588 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
CYBA-205ENST00000565588 CSRNP3Q8WYN3 585 aa18.36■□□□□ 0.53
CYBA-205ENST00000565588 RIMBP3Q9UFD9 1639 aa18.36■□□□□ 0.53
CYBA-205ENST00000565588 KIAA0586Q9BVV6 1533 aa18.33■□□□□ 0.53
CYBA-205ENST00000565588 CEP170Q5SW79 1584 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms