Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TREM2Q9NZC2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREM2Q9NZC2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.66■□□□□ 0.42
TREM2Q9NZC2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TREM2Q9NZC2 KRT16P2-201ENST00000414673 1423 ntBASIC17.66■□□□□ 0.42
TREM2Q9NZC2 CNN2P6-201ENST00000439038 900 ntBASIC17.66■□□□□ 0.42
TREM2Q9NZC2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.66■□□□□ 0.42
TREM2Q9NZC2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.66■□□□□ 0.42
TREM2Q9NZC2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TREM2Q9NZC2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.66■□□□□ 0.42
TREM2Q9NZC2 AL121832.2-201ENST00000610979 668 ntBASIC17.66■□□□□ 0.42
TREM2Q9NZC2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.66■□□□□ 0.42
TREM2Q9NZC2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
TREM2Q9NZC2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TREM2Q9NZC2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TREM2Q9NZC2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TREM2Q9NZC2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.65■□□□□ 0.42
TREM2Q9NZC2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.64■□□□□ 0.42
TREM2Q9NZC2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TREM2Q9NZC2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREM2Q9NZC2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.64■□□□□ 0.41
TREM2Q9NZC2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.64■□□□□ 0.41
TREM2Q9NZC2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TREM2Q9NZC2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.64■□□□□ 0.41
TREM2Q9NZC2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TREM2Q9NZC2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.64■□□□□ 0.41
TREM2Q9NZC2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.64■□□□□ 0.41
TREM2Q9NZC2 SLC7A5P1-201ENST00000568957 537 ntBASIC17.64■□□□□ 0.41
TREM2Q9NZC2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
TREM2Q9NZC2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.64■□□□□ 0.41
TREM2Q9NZC2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TREM2Q9NZC2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREM2Q9NZC2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TREM2Q9NZC2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREM2Q9NZC2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.63■□□□□ 0.41
TREM2Q9NZC2 RBM17P2-201ENST00000616397 1405 ntBASIC17.63■□□□□ 0.41
TREM2Q9NZC2 AC007952.6-201ENST00000573168 2673 ntBASIC17.63■□□□□ 0.41
TREM2Q9NZC2 AC003957.1-201ENST00000625108 2673 ntBASIC17.63■□□□□ 0.41
TREM2Q9NZC2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 AC013268.1-206ENST00000638368 961 ntBASIC17.62■□□□□ 0.41
TREM2Q9NZC2 AC112229.1-201ENST00000639295 961 ntBASIC17.62■□□□□ 0.41
TREM2Q9NZC2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TREM2Q9NZC2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.61■□□□□ 0.41
TREM2Q9NZC2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TREM2Q9NZC2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TREM2Q9NZC2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.61■□□□□ 0.41
TREM2Q9NZC2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TREM2Q9NZC2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TREM2Q9NZC2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TREM2Q9NZC2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.61■□□□□ 0.41
TREM2Q9NZC2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.61■□□□□ 0.41
TREM2Q9NZC2 TSPY6P-201ENST00000448518 926 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms