Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
SHKBP1Q8TBC3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SHKBP1Q8TBC3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SHKBP1Q8TBC3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.58■■□□□ 1.04
SHKBP1Q8TBC3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.58■■□□□ 1.04
SHKBP1Q8TBC3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.58■■□□□ 1.04
SHKBP1Q8TBC3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
SHKBP1Q8TBC3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.58■■□□□ 1.04
SHKBP1Q8TBC3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHKBP1Q8TBC3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHKBP1Q8TBC3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHKBP1Q8TBC3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHKBP1Q8TBC3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHKBP1Q8TBC3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.57■■□□□ 1.04
SHKBP1Q8TBC3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHKBP1Q8TBC3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHKBP1Q8TBC3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHKBP1Q8TBC3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHKBP1Q8TBC3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.57■■□□□ 1.04
SHKBP1Q8TBC3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHKBP1Q8TBC3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHKBP1Q8TBC3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SHKBP1Q8TBC3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 FBXW4P1-201ENST00000426721 2239 ntBASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.55■■□□□ 1.04
SHKBP1Q8TBC3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 PNMA6B-201ENST00000538162 1200 ntBASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHKBP1Q8TBC3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 AP006294.2-201ENST00000641667 209 ntBASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms