Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
DNAAF1Q8NEP3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 AC110285.6-201ENST00000617652 491 ntBASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.99■□□□□ 0.47
DNAAF1Q8NEP3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 AF213884.3-201ENST00000563833 479 ntBASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNAAF1Q8NEP3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNAAF1Q8NEP3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNAAF1Q8NEP3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DNAAF1Q8NEP3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.96■□□□□ 0.47
DNAAF1Q8NEP3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.96■□□□□ 0.47
DNAAF1Q8NEP3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNAAF1Q8NEP3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms