Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.297e-7■■■□□ 15.6
SRSF1Q07955 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.12■□□□□ 0.655e-11■■■□□ 15.6
SRSF1Q07955 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.285e-11■■■□□ 15.6
SRSF1Q07955 STK36-207ENST00000440309 4721 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.025e-7■■■□□ 15.5
SRSF1Q07955 STK36-202ENST00000392105 4821 ntTSL 1 (best) BASIC7.99□□□□□ -1.135e-7■■■□□ 15.5
SRSF1Q07955 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.225e-7■■■□□ 15.5
SRSF1Q07955 GPI-212ENST00000589985 1516 ntTSL 317.24■□□□□ 0.354e-8■■■□□ 15.5
SRSF1Q07955 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.196e-14■■■□□ 15.5
SRSF1Q07955 MPP1-209ENST00000453245 729 ntTSL 513.72□□□□□ -0.216e-14■■■□□ 15.5
SRSF1Q07955 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.63□□□□□ -0.236e-14■■■□□ 15.5
SRSF1Q07955 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.99□□□□□ -0.336e-14■■■□□ 15.5
SRSF1Q07955 MPP1-208ENST00000439370 2066 ntTSL 510.63□□□□□ -0.716e-14■■■□□ 15.5
SRSF1Q07955 MPP1-216ENST00000491955 2378 ntTSL 25.3□□□□□ -1.566e-14■■■□□ 15.5
SRSF1Q07955 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.751e-7■■■□□ 15.5
SRSF1Q07955 MED13-206ENST00000583958 1068 ntTSL 1 (best)6.17□□□□□ -1.426e-6■■■□□ 15.5
SRSF1Q07955 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.115e-7■■■□□ 15.5
SRSF1Q07955 SPATA20-205ENST00000503127 2734 ntTSL 1 (best)12.85□□□□□ -0.355e-7■■■□□ 15.5
SRSF1Q07955 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.82□□□□□ -0.365e-7■■■□□ 15.5
SRSF1Q07955 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.18□□□□□ -0.465e-7■■■□□ 15.5
SRSF1Q07955 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.75e-7■■■□□ 15.5
SRSF1Q07955 SPATA20-220ENST00000511937 2669 ntTSL 1 (best)10.38□□□□□ -0.755e-7■■■□□ 15.5
SRSF1Q07955 SPATA20-204ENST00000503063 3232 ntTSL 29.86□□□□□ -0.835e-7■■■□□ 15.5
SRSF1Q07955 SPATA20-208ENST00000504334 3539 ntTSL 29.83□□□□□ -0.845e-7■■■□□ 15.5
SRSF1Q07955 ANKRD20A5P-205ENST00000581181 1180 ntTSL 321.65■■□□□ 1.062e-7■■■□□ 15.5
SRSF1Q07955 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.07■□□□□ 02e-7■■■□□ 15.5
SRSF1Q07955 ANKRD20A5P-206ENST00000581363 582 ntTSL 311.64□□□□□ -0.552e-7■■■□□ 15.5
SRSF1Q07955 ANKRD20A5P-201ENST00000431648 3556 ntBASIC7.45□□□□□ -1.222e-7■■■□□ 15.5
SRSF1Q07955 WARS-229ENST00000556435 528 ntTSL 213.85□□□□□ -0.191e-12■■■□□ 15.5
SRSF1Q07955 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.438e-9■■■□□ 15.5
SRSF1Q07955 MGEA5-208ENST00000479811 695 ntTSL 510.61□□□□□ -0.718e-9■■■□□ 15.5
SRSF1Q07955 RNF213-202ENST00000411702 6428 ntTSL 29.85□□□□□ -0.838e-9■■■□□ 15.5
SRSF1Q07955 SSFA2-215ENST00000495248 219 ntTSL 59.21□□□□□ -0.948e-9■■■□□ 15.5
SRSF1Q07955 SPG7-220ENST00000569363 443 ntTSL 26.16□□□□□ -1.428e-18■■■□□ 15.5
SRSF1Q07955 WARS-240ENST00000557297 821 ntTSL 35.5□□□□□ -1.531e-12■■■□□ 15.5
SRSF1Q07955 MGEA5-210ENST00000492204 519 ntTSL 25.1□□□□□ -1.598e-9■■■□□ 15.5
SRSF1Q07955 SARS-203ENST00000468588 1582 ntTSL 24.89□□□□□ -1.638e-9■■■□□ 15.5
SRSF1Q07955 SSFA2-210ENST00000470129 269 ntTSL 33.07□□□□□ -1.928e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-204ENST00000536818 552 ntTSL 418.46■□□□□ 0.554e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.05■□□□□ -04e-9■■■□□ 15.5
SRSF1Q07955 EME2-206ENST00000570069 5613 ntTSL 214.19□□□□□ -0.144e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-205ENST00000536846 895 ntTSL 513.6□□□□□ -0.234e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-207ENST00000537923 556 ntTSL 412.93□□□□□ -0.344e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-217ENST00000545595 1615 ntTSL 1 (best)12.89□□□□□ -0.354e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-216ENST00000543405 575 ntTSL 512.85□□□□□ -0.354e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC12.02□□□□□ -0.484e-9■■■□□ 15.5
SRSF1Q07955 EME2-202ENST00000561903 4586 ntTSL 211.65□□□□□ -0.544e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-218ENST00000585385 976 ntTSL 511.58□□□□□ -0.564e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-201ENST00000280663 5936 ntTSL 211.35□□□□□ -0.594e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-213ENST00000541444 676 ntTSL 510.73□□□□□ -0.694e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-206ENST00000537784 2876 ntTSL 1 (best)9.37□□□□□ -0.914e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-202ENST00000382722 5475 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.974e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-219ENST00000585708 3273 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.014e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-203ENST00000444595 4450 ntTSL 1 (best)7.65□□□□□ -1.184e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC7.64□□□□□ -1.194e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-223ENST00000588077 3311 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.194e-9■■■□□ 15.5
SRSF1Q07955 CACNA2D4-221ENST00000586184 3499 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.214e-9■■■□□ 15.5
SRSF1Q07955 GABRE-207ENST00000476016 813 ntTSL 46.88□□□□□ -1.318e-11■■■□□ 15.5
SRSF1Q07955 SFI1-217ENST00000466991 545 ntTSL 515.17■□□□□ 0.023e-9■■■□□ 15.5
SRSF1Q07955 SFI1-206ENST00000417682 1817 ntTSL 514.25□□□□□ -0.133e-9■■■□□ 15.5
SRSF1Q07955 SFI1-226ENST00000491973 580 ntTSL 414.16□□□□□ -0.143e-9■■■□□ 15.5
SRSF1Q07955 SFI1-228ENST00000524296 2108 ntTSL 511.97□□□□□ -0.493e-9■■■□□ 15.5
SRSF1Q07955 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.85□□□□□ -0.513e-9■■■□□ 15.5
SRSF1Q07955 SFI1-212ENST00000452250 2625 ntTSL 211.57□□□□□ -0.563e-9■■■□□ 15.5
SRSF1Q07955 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.693e-9■■■□□ 15.5
SRSF1Q07955 SFI1-202ENST00000382162 5250 ntTSL 210.69□□□□□ -0.73e-9■■■□□ 15.5
SRSF1Q07955 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.733e-9■■■□□ 15.5
SRSF1Q07955 SFI1-203ENST00000400288 4002 ntAPPRIS P4 TSL 2 BASIC9.33□□□□□ -0.923e-9■■■□□ 15.5
SRSF1Q07955 SFI1-204ENST00000400289 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.063e-9■■■□□ 15.5
SRSF1Q07955 STK25-215ENST00000439101 779 ntTSL 524.28■■□□□ 1.488e-8■■■□□ 15.4
SRSF1Q07955 STK25-210ENST00000426941 575 ntTSL 221.62■■□□□ 1.058e-8■■■□□ 15.4
SRSF1Q07955 STK25-219ENST00000452891 575 ntTSL 421.62■■□□□ 1.058e-8■■■□□ 15.4
SRSF1Q07955 STK25-207ENST00000420551 395 ntTSL 519.4■□□□□ 0.78e-8■■■□□ 15.4
SRSF1Q07955 STK25-227ENST00000483603 572 ntTSL 518.94■□□□□ 0.628e-8■■■□□ 15.4
SRSF1Q07955 STK25-214ENST00000436917 499 ntTSL 418.94■□□□□ 0.628e-8■■■□□ 15.4
SRSF1Q07955 CCDC130-209ENST00000588809 694 ntTSL 318.25■□□□□ 0.518e-8■■■□□ 15.4
SRSF1Q07955 CCDC130-210ENST00000589096 720 nt18.06■□□□□ 0.488e-8■■■□□ 15.4
SRSF1Q07955 ABCA7-212ENST00000530092 571 ntTSL 417.34■□□□□ 0.378e-8■■■□□ 15.4
SRSF1Q07955 TYK2-220ENST00000534228 589 ntTSL 317.25■□□□□ 0.358e-8■■■□□ 15.4
SRSF1Q07955 ESS2-202ENST00000434568 1808 ntTSL 516.84■□□□□ 0.295e-7■■■□□ 15.4
SRSF1Q07955 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.6■□□□□ 0.258e-8■■■□□ 15.4
SRSF1Q07955 TYK2-211ENST00000529412 711 ntTSL 316.49■□□□□ 0.238e-8■■■□□ 15.4
SRSF1Q07955 TXNRD2-220ENST00000634537 1086 ntTSL 516.45■□□□□ 0.228e-8■■■□□ 15.4
SRSF1Q07955 CCDC130-203ENST00000585844 887 ntTSL 316.28■□□□□ 0.28e-8■■■□□ 15.4
SRSF1Q07955 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.188e-8■■■□□ 15.4
SRSF1Q07955 CCDC130-206ENST00000587019 756 ntTSL 316.12■□□□□ 0.178e-8■■■□□ 15.4
SRSF1Q07955 TXNRD2-207ENST00000462843 810 ntTSL 316.08■□□□□ 0.168e-8■■■□□ 15.4
SRSF1Q07955 TXNRD2-219ENST00000634471 748 ntTSL 316.08■□□□□ 0.168e-8■■■□□ 15.4
SRSF1Q07955 STK25-232ENST00000495372 561 ntTSL 215.88■□□□□ 0.138e-8■■■□□ 15.4
SRSF1Q07955 TAF1D-207ENST00000527169 1127 ntTSL 515.7■□□□□ 0.11e-8■■■□□ 15.4
SRSF1Q07955 CCDC130-205ENST00000586666 914 ntTSL 315.62■□□□□ 0.098e-8■■■□□ 15.4
SRSF1Q07955 CSTF3-204ENST00000524556 558 ntTSL 314.91□□□□□ -0.028e-8■■■□□ 15.4
SRSF1Q07955 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.138e-8■■■□□ 15.4
SRSF1Q07955 CCDC130-212ENST00000593174 1783 ntTSL 514.22□□□□□ -0.138e-8■■■□□ 15.4
SRSF1Q07955 ESS2-204ENST00000472073 2101 ntTSL 514.08□□□□□ -0.165e-7■■■□□ 15.4
SRSF1Q07955 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.98□□□□□ -0.178e-8■■■□□ 15.4
SRSF1Q07955 TAF1D-205ENST00000526015 1735 ntTSL 1 (best)13.81□□□□□ -0.21e-8■■■□□ 15.4
SRSF1Q07955 TXNRD2-213ENST00000487165 2020 ntTSL 1 (best)13.5□□□□□ -0.258e-8■■■□□ 15.4
SRSF1Q07955 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.97□□□□□ -0.338e-8■■■□□ 15.4
SRSF1Q07955 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.93□□□□□ -0.348e-8■■■□□ 15.4
SRSF1Q07955 CCDC130-202ENST00000540216 995 ntTSL 212.34□□□□□ -0.438e-8■■■□□ 15.4
Retrieved 100 of 14,836 protein–RNA pairs in 117.8 ms