RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 NISCHQ9Y2I1 1504 aa16.59■□□□□ 0.25
SPG7-220ENST00000569363 AEBP2Q6ZN18 517 aaPredicted RBP15.94■□□□□ 0.14
SPG7-220ENST00000569363 CHIC1Q5VXU3 224 aa15.24■□□□□ 0.03
SPG7-220ENST00000569363 CCDC180Q9P1Z9 1646 aa14.22□□□□□ -0.13
SPG7-220ENST00000569363 ZCCHC6Q5VYS8 1495 aaKnown RBP14.05□□□□□ -0.16
SPG7-220ENST00000569363 SHROOM4Q9ULL8 1493 aa13.89□□□□□ -0.19
SPG7-220ENST00000569363 DCAF1Q9Y4B6 1507 aa13.74□□□□□ -0.21
SPG7-220ENST00000569363 SENP3Q9H4L4 574 aaPredicted RBP13.73□□□□□ -0.21
SPG7-220ENST00000569363 SUPT5HO00267 1087 aaKnown RBP13.68□□□□□ -0.22
SPG7-220ENST00000569363 ABCC9O60706 1549 aa13.64□□□□□ -0.23
SPG7-220ENST00000569363 DCAF8L2P0C7V8 631 aa13.51□□□□□ -0.25
SPG7-220ENST00000569363 PHF23Q9BUL5 403 aaPredicted RBP13.49□□□□□ -0.25
SPG7-220ENST00000569363 MYO15BQ96JP2 1530 aa13.38□□□□□ -0.27
SPG7-220ENST00000569363 SCRIBQ14160 1630 aa13.12□□□□□ -0.31
SPG7-220ENST00000569363 NACADO15069 1562 aa13.11□□□□□ -0.31
SPG7-220ENST00000569363 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
SPG7-220ENST00000569363 RB1CC1Q8TDY2 1594 aa13.08□□□□□ -0.32
SPG7-220ENST00000569363 RSF1Q96T23 1441 aaPredicted RBP13.07□□□□□ -0.32
SPG7-220ENST00000569363 HRCP23327 699 aa13.07□□□□□ -0.32
SPG7-220ENST00000569363 PCGF6Q9BYE7 350 aa12.93□□□□□ -0.34
SPG7-220ENST00000569363 LOC105371045A0A1W2PR82 267 aa12.88□□□□□ -0.35
SPG7-220ENST00000569363 BICRAQ9NZM4 1560 aa12.88□□□□□ -0.35
SPG7-220ENST00000569363 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
SPG7-220ENST00000569363 TRIM26Q12899 539 aaPredicted RBP12.84□□□□□ -0.35
SPG7-220ENST00000569363 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
SPG7-220ENST00000569363 CECR2Q9BXF3 1484 aa12.8□□□□□ -0.36
SPG7-220ENST00000569363 BAZ1AQ9NRL2 1556 aaPredicted RBP12.78□□□□□ -0.36
SPG7-220ENST00000569363 WIZO95785 1651 aa12.73□□□□□ -0.37
SPG7-220ENST00000569363 ZEB1P37275 1124 aaPredicted RBP12.7□□□□□ -0.38
SPG7-220ENST00000569363 FOXD1Q16676 465 aa12.7□□□□□ -0.38
SPG7-220ENST00000569363 TOP2AP11388 1531 aaKnown RBP12.66□□□□□ -0.38
SPG7-220ENST00000569363 EIF4G1Q04637 1599 aaKnown RBP12.65□□□□□ -0.38
SPG7-220ENST00000569363 SMARCA4P51532 1647 aa12.62□□□□□ -0.39
SPG7-220ENST00000569363 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
SPG7-220ENST00000569363 DNAJC5BQ9UF47 199 aa12.6□□□□□ -0.39
SPG7-220ENST00000569363 FAM9AQ8IZU1 332 aaPredicted RBP12.59□□□□□ -0.39
SPG7-220ENST00000569363 PPARGC1BQ86YN6 1023 aaKnown RBP12.58□□□□□ -0.4
SPG7-220ENST00000569363 SMARCA2P51531 1590 aa12.54□□□□□ -0.4
SPG7-220ENST00000569363 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
SPG7-220ENST00000569363 EEA1Q15075 1411 aa12.5□□□□□ -0.41
SPG7-220ENST00000569363 PEG3Q9GZU2 1588 aa12.46□□□□□ -0.42
SPG7-220ENST00000569363 WRNQ14191 1432 aaPredicted RBP eCLIP12.43□□□□□ -0.42
SPG7-220ENST00000569363 CC2D2AQ9P2K1 1620 aa12.42□□□□□ -0.42
SPG7-220ENST00000569363 ABCC8Q09428 1581 aa12.41□□□□□ -0.42
SPG7-220ENST00000569363 TNIKQ9UKE5 1360 aa12.39□□□□□ -0.43
SPG7-220ENST00000569363 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
SPG7-220ENST00000569363 CEP162Q5TB80 1403 aa12.34□□□□□ -0.43
SPG7-220ENST00000569363 CSRNP3Q8WYN3 585 aa12.33□□□□□ -0.44
SPG7-220ENST00000569363 GOLGA3Q08378 1498 aa12.32□□□□□ -0.44
SPG7-220ENST00000569363 SOGA1O94964 1423 aa12.31□□□□□ -0.44
SPG7-220ENST00000569363 ATAD2BQ9ULI0 1458 aa12.28□□□□□ -0.44
SPG7-220ENST00000569363 BAZ1BQ9UIG0 1483 aaKnown RBP12.26□□□□□ -0.45
SPG7-220ENST00000569363 CEP164Q9UPV0 1460 aa12.26□□□□□ -0.45
SPG7-220ENST00000569363 KIF21BO75037 1637 aa12.26□□□□□ -0.45
SPG7-220ENST00000569363 PLPPR3Q6T4P5 718 aa12.23□□□□□ -0.45
SPG7-220ENST00000569363 CCER1Q8TC90 406 aaPredicted RBP12.23□□□□□ -0.45
SPG7-220ENST00000569363 UBTFP17480 764 aaKnown RBP12.22□□□□□ -0.45
SPG7-220ENST00000569363 RUSC2Q8N2Y8 1516 aa12.21□□□□□ -0.46
SPG7-220ENST00000569363 SYNJ1O43426 1573 aa12.2□□□□□ -0.46
SPG7-220ENST00000569363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.46
SPG7-220ENST00000569363 TOP2BQ02880 1626 aa12.14□□□□□ -0.47
SPG7-220ENST00000569363 CLIP1P30622 1438 aa12.13□□□□□ -0.47
SPG7-220ENST00000569363 HMGXB3Q12766 1538 aa12.12□□□□□ -0.47
SPG7-220ENST00000569363 BIVM-ERCC5R4GMW8 1640 aa12.12□□□□□ -0.47
SPG7-220ENST00000569363 VPS8Q8N3P4 1428 aa12.11□□□□□ -0.47
SPG7-220ENST00000569363 NCAPD3P42695 1498 aa12.09□□□□□ -0.47
SPG7-220ENST00000569363 ERICH3Q5RHP9 1530 aa12.08□□□□□ -0.48
SPG7-220ENST00000569363 APLP2Q06481 763 aa12.06□□□□□ -0.48
SPG7-220ENST00000569363 RAPGEF2Q9Y4G8 1499 aa12.03□□□□□ -0.48
SPG7-220ENST00000569363 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
SPG7-220ENST00000569363 MSH5O43196 834 aa12.01□□□□□ -0.49
SPG7-220ENST00000569363 TTBK1Q5TCY1 1321 aaPredicted RBP12.01□□□□□ -0.49
SPG7-220ENST00000569363 PRXQ9BXM0 1461 aa12.01□□□□□ -0.49
SPG7-220ENST00000569363 DIEXFQ68CQ4 756 aaKnown RBP12□□□□□ -0.49
SPG7-220ENST00000569363 KIF27Q86VH2 1401 aa11.98□□□□□ -0.49
SPG7-220ENST00000569363 CFTRP13569 1480 aa11.97□□□□□ -0.49
SPG7-220ENST00000569363 ZNF316A6NFI3 1004 aaPredicted RBP11.97□□□□□ -0.49
SPG7-220ENST00000569363 CENPBP07199 599 aaPredicted RBP11.97□□□□□ -0.49
SPG7-220ENST00000569363 SCAF1Q9H7N4 1312 aaKnown RBP11.95□□□□□ -0.5
SPG7-220ENST00000569363 CUX1P39880 1505 aa11.95□□□□□ -0.5
SPG7-220ENST00000569363 ACIN1Q9UKV3 1341 aaKnown RBP11.94□□□□□ -0.5
SPG7-220ENST00000569363 PRDM2Q13029 1718 aa11.94□□□□□ -0.5
SPG7-220ENST00000569363 CLSPNQ9HAW4 1339 aa11.93□□□□□ -0.5
SPG7-220ENST00000569363 ARAP1Q96P48 1450 aa11.91□□□□□ -0.5
SPG7-220ENST00000569363 PIAS4Q8N2W9 510 aaPredicted RBP11.91□□□□□ -0.5
SPG7-220ENST00000569363 HNRNPUL2Q1KMD3 747 aaKnown RBP11.9□□□□□ -0.5
SPG7-220ENST00000569363 NESP48681 1621 aa11.86□□□□□ -0.51
SPG7-220ENST00000569363 RRBP1Q9P2E9 1410 aaKnown RBP11.84□□□□□ -0.51
SPG7-220ENST00000569363 KIF21AQ7Z4S6 1674 aa11.84□□□□□ -0.51
SPG7-220ENST00000569363 MAP3K1Q13233 1512 aa11.83□□□□□ -0.52
SPG7-220ENST00000569363 PPP6R1Q9UPN7 881 aa11.83□□□□□ -0.52
SPG7-220ENST00000569363 CADPSQ9ULU8 1353 aa11.82□□□□□ -0.52
SPG7-220ENST00000569363 NEUROD1Q13562 356 aa11.82□□□□□ -0.52
SPG7-220ENST00000569363 THOC2Q8NI27 1593 aaKnown RBP11.81□□□□□ -0.52
SPG7-220ENST00000569363 ADRA2BP18089 450 aa11.81□□□□□ -0.52
SPG7-220ENST00000569363 CUX2O14529 1486 aa11.81□□□□□ -0.52
SPG7-220ENST00000569363 ARHGAP35Q9NRY4 1499 aa11.8□□□□□ -0.52
SPG7-220ENST00000569363 RANGAP1P46060 587 aaPredicted RBP11.79□□□□□ -0.52
SPG7-220ENST00000569363 IGF1RP08069 1367 aa11.78□□□□□ -0.52
SPG7-220ENST00000569363 DHX57Q6P158 1386 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms