Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 PYM1-206ENST00000549939 653 ntTSL 514.14□□□□□ -0.151e-7■■■■□ 22.8
MATR3P43243 ZNF189-203ENST00000374861 3134 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.262e-7■■■■□ 22.8
MATR3P43243 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC13.37□□□□□ -0.271e-7■■■■□ 22.8
MATR3P43243 TMCO3-205ENST00000465556 314 ntTSL 313.13□□□□□ -0.311e-6■■■■□ 22.8
MATR3P43243 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.351e-6■■■■□ 22.8
MATR3P43243 AL442125.1-201ENST00000619092 3362 ntBASIC12.38□□□□□ -0.431e-6■■■■□ 22.8
MATR3P43243 PYM1-207ENST00000557259 775 ntTSL 2 BASIC12.15□□□□□ -0.461e-7■■■■□ 22.8
MATR3P43243 PYM1-201ENST00000302533 890 ntTSL 312.14□□□□□ -0.471e-7■■■■□ 22.8
MATR3P43243 BRCC3-204ENST00000369462 2846 ntTSL 1 (best) BASIC11.97□□□□□ -0.491e-6■■■■□ 22.8
MATR3P43243 XYLB-201ENST00000207870 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.523e-12■■■■□ 22.8
MATR3P43243 ZC3H14-211ENST00000555755 2529 ntAPPRIS ALT1 TSL 2 BASIC11.34□□□□□ -0.593e-8■■■■□ 22.8
MATR3P43243 MRPL19-202ENST00000393909 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.671e-6■■■■□ 22.8
MATR3P43243 PYM1-202ENST00000398213 1073 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.691e-7■■■■□ 22.8
MATR3P43243 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.691e-6■■■■□ 22.8
MATR3P43243 XYLB-202ENST00000424034 3484 ntTSL 210.54□□□□□ -0.723e-12■■■■□ 22.8
MATR3P43243 ZNF189-204ENST00000615466 2316 ntTSL 3 BASIC10.31□□□□□ -0.762e-7■■■■□ 22.8
MATR3P43243 BRCC3-207ENST00000411985 688 ntTSL 510.05□□□□□ -0.81e-6■■■■□ 22.8
MATR3P43243 BRCC3-206ENST00000399042 954 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.831e-6■■■■□ 22.8
MATR3P43243 BRCC3-210ENST00000630295 954 ntTSL 5 BASIC9.85□□□□□ -0.831e-6■■■■□ 22.8
MATR3P43243 BRCC3-205ENST00000399026 456 ntTSL 59.16□□□□□ -0.941e-6■■■■□ 22.8
MATR3P43243 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC9.1□□□□□ -0.955e-9■■■■□ 22.8
MATR3P43243 ALDH1L2-204ENST00000552270 2746 ntTSL 28.8□□□□□ -11e-6■■■■□ 22.8
MATR3P43243 PYM1-204ENST00000454792 884 ntTSL 2 BASIC8.54□□□□□ -1.041e-7■■■■□ 22.8
MATR3P43243 BRCC3-208ENST00000453705 2694 ntTSL 58.5□□□□□ -1.051e-6■■■■□ 22.8
MATR3P43243 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.45□□□□□ -1.062e-7■■■■□ 22.8
MATR3P43243 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC8.42□□□□□ -1.061e-6■■■■□ 22.8
MATR3P43243 LINC01088-207ENST00000511241 679 ntTSL 27.86□□□□□ -1.151e-6■■■■□ 22.8
MATR3P43243 LINC01088-206ENST00000510667 534 ntTSL 37.48□□□□□ -1.211e-6■■■■□ 22.8
MATR3P43243 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.271e-6■■■■□ 22.8
MATR3P43243 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.283e-8■■■■□ 22.8
MATR3P43243 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.08□□□□□ -1.442e-7■■■■□ 22.8
MATR3P43243 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.72□□□□□ -1.493e-8■■■■□ 22.8
MATR3P43243 LINC01088-209ENST00000512130 525 ntTSL 35.71□□□□□ -1.51e-6■■■■□ 22.8
MATR3P43243 ZC3H14-216ENST00000556000 2092 ntTSL 1 (best)5.71□□□□□ -1.53e-8■■■■□ 22.8
MATR3P43243 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.37□□□□□ -1.551e-7■■■■□ 22.8
MATR3P43243 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.09□□□□□ -1.591e-6■■■■□ 22.8
MATR3P43243 MRPL19-204ENST00000453233 475 ntTSL 34.87□□□□□ -1.631e-6■■■■□ 22.8
MATR3P43243 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.68□□□□□ -1.661e-6■■■■□ 22.8
MATR3P43243 ALDH1L2-203ENST00000549335 7403 ntTSL 24.49□□□□□ -1.691e-6■■■■□ 22.8
MATR3P43243 MRPL19-206ENST00000492255 359 ntTSL 33.91□□□□□ -1.781e-6■■■■□ 22.8
MATR3P43243 LINC01088-211ENST00000515597 664 ntTSL 1 (best)3.37□□□□□ -1.871e-6■■■■□ 22.8
MATR3P43243 LINC01088-210ENST00000513153 695 ntTSL 32.87□□□□□ -1.951e-6■■■■□ 22.8
MATR3P43243 ZC3H14-217ENST00000556110 400 ntTSL 31.08□□□□□ -2.243e-8■■■■□ 22.8
MATR3P43243 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.217e-7■■■■□ 22.8
MATR3P43243 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.617e-7■■■■□ 22.8
MATR3P43243 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.47□□□□□ -1.697e-7■■■■□ 22.8
MATR3P43243 VAPA-205ENST00000578314 532 ntTSL 325.06■■□□□ 1.62e-6■■■■□ 22.8
MATR3P43243 VAPA-204ENST00000577901 917 ntTSL 217.43■□□□□ 0.382e-6■■■■□ 22.8
MATR3P43243 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.78■□□□□ 0.282e-6■■■■□ 22.8
MATR3P43243 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.232e-6■■■■□ 22.8
MATR3P43243 VAPA-209ENST00000585042 567 ntTSL 416.33■□□□□ 0.22e-6■■■■□ 22.8
MATR3P43243 VAPA-208ENST00000584796 654 ntTSL 32.23□□□□□ -2.052e-6■■■■□ 22.8
MATR3P43243 PPP2R2D-207ENST00000616467 2058 ntTSL 1 (best)27.74■■■□□ 2.033e-6■■■■□ 22.8
MATR3P43243 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.813e-6■■■■□ 22.8
MATR3P43243 PPP2R2D-204ENST00000482010 1792 ntTSL 220.23■□□□□ 0.833e-6■■■■□ 22.8
MATR3P43243 PPP2R2D-202ENST00000470416 6203 ntTSL 1 (best)12.4□□□□□ -0.423e-6■■■■□ 22.8
MATR3P43243 MBOAT2-207ENST00000477073 754 ntTSL 323.69■■□□□ 1.383e-6■■■■□ 22.8
MATR3P43243 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.473e-6■■■■□ 22.8
MATR3P43243 MBOAT2-203ENST00000462696 580 ntTSL 416.44■□□□□ 0.223e-6■■■■□ 22.8
MATR3P43243 MBOAT2-209ENST00000486484 1351 ntTSL 24.68□□□□□ -1.663e-6■■■■□ 22.8
MATR3P43243 XIST-209ENST00000602587 583 ntTSL 57.22□□□□□ -1.253e-20■■■■□ 22.8
MATR3P43243 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 25e-6■■■■□ 22.8
MATR3P43243 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.18■■□□□ 1.786e-6■■■■□ 22.8
MATR3P43243 PAIP1-204ENST00000504075 501 ntTSL 325.77■■□□□ 1.726e-6■■■■□ 22.8
MATR3P43243 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.512e-6■■■■□ 22.8
MATR3P43243 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.195e-6■■■■□ 22.8
MATR3P43243 PAIP1-206ENST00000508537 752 ntTSL 222.25■■□□□ 1.156e-6■■■■□ 22.8
MATR3P43243 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.026e-6■■■■□ 22.8
MATR3P43243 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.08■□□□□ 0.976e-6■■■■□ 22.8
MATR3P43243 PAIP1-205ENST00000504639 1766 ntTSL 520.55■□□□□ 0.886e-6■■■■□ 22.8
MATR3P43243 ATL2-211ENST00000456736 578 ntTSL 318.59■□□□□ 0.572e-6■■■■□ 22.8
MATR3P43243 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.512e-7■■■■□ 22.8
MATR3P43243 ATL2-212ENST00000472097 561 ntTSL 317.86■□□□□ 0.452e-6■■■■□ 22.8
MATR3P43243 ATL2-205ENST00000416222 593 ntTSL 417.86■□□□□ 0.451e-6■■■■□ 22.8
MATR3P43243 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.64■□□□□ 0.415e-6■■■■□ 22.8
MATR3P43243 ATL2-208ENST00000449130 526 ntTSL 316.91■□□□□ 0.32e-6■■■■□ 22.8
MATR3P43243 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.61■□□□□ 0.255e-6■■■■□ 22.8
MATR3P43243 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC15.37■□□□□ 0.052e-7■■■■□ 22.8
MATR3P43243 ATL2-209ENST00000451483 576 ntTSL 415.28■□□□□ 0.042e-6■■■■□ 22.8
MATR3P43243 DNAJC7-211ENST00000588814 1719 ntTSL 215.21■□□□□ 0.035e-6■■■■□ 22.8
MATR3P43243 WDR60-205ENST00000467220 5410 ntTSL 215.14■□□□□ 0.015e-6■■■■□ 22.8
MATR3P43243 WDR60-203ENST00000444851 2769 ntTSL 1 (best)15.1■□□□□ 0.015e-6■■■■□ 22.8
MATR3P43243 XRRA1-215ENST00000531849 5084 ntTSL 214.7□□□□□ -0.062e-7■■■■□ 22.8
MATR3P43243 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.095e-6■■■■□ 22.8
MATR3P43243 XRRA1-201ENST00000321448 4695 ntTSL 1 (best) BASIC14.1□□□□□ -0.152e-7■■■■□ 22.8
MATR3P43243 XRRA1-213ENST00000530562 2339 ntTSL 213.84□□□□□ -0.192e-7■■■■□ 22.8
MATR3P43243 ATL2-215ENST00000486927 553 ntTSL 413.82□□□□□ -0.21e-6■■■■□ 22.8
MATR3P43243 PCCA-204ENST00000413170 397 ntTSL 313.75□□□□□ -0.213e-9■■■■□ 22.8
MATR3P43243 XRRA1-214ENST00000531449 1588 ntTSL 1 (best)13.47□□□□□ -0.252e-7■■■■□ 22.8
MATR3P43243 DIAPH1-209ENST00000491754 557 ntTSL 412.83□□□□□ -0.365e-6■■■■□ 22.8
MATR3P43243 ATL2-207ENST00000443098 775 ntTSL 512.33□□□□□ -0.442e-6■■■■□ 22.8
MATR3P43243 XRRA1-203ENST00000431210 2995 ntTSL 212.25□□□□□ -0.455e-6■■■■□ 22.8
MATR3P43243 RAD51B-205ENST00000471583 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.531e-6■■■■□ 22.8
MATR3P43243 TATDN2-203ENST00000448281 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.582e-6■■■■□ 22.8
MATR3P43243 PCCA-208ENST00000458283 669 ntTSL 311.27□□□□□ -0.613e-9■■■■□ 22.8
MATR3P43243 RAD51B-208ENST00000479335 1615 ntTSL 1 (best)10.64□□□□□ -0.711e-6■■■■□ 22.8
MATR3P43243 QKI-209ENST00000537124 551 ntTSL 59.8□□□□□ -0.842e-11■■■■□ 22.8
MATR3P43243 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC9.47□□□□□ -0.896e-11■■■■□ 22.8
MATR3P43243 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC8.87□□□□□ -0.991e-6■■■■□ 22.8
MATR3P43243 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC8.79□□□□□ -11e-6■■■■□ 22.8
Retrieved 100 of 16,209 protein–RNA pairs in 156.6 ms