RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 NISCHQ9Y2I1 1504 aa25.49■■□□□ 1.67
BRCC3-204ENST00000369462 CCDC180Q9P1Z9 1646 aa22.34■■□□□ 1.17
BRCC3-204ENST00000369462 ABCC9O60706 1549 aa21.53■■□□□ 1.04
BRCC3-204ENST00000369462 ZCCHC6Q5VYS8 1495 aaKnown RBP21.33■■□□□ 1
BRCC3-204ENST00000369462 DCAF8L2P0C7V8 631 aa21.27■■□□□ 1
BRCC3-204ENST00000369462 DCAF1Q9Y4B6 1507 aa21.05■□□□□ 0.96
BRCC3-204ENST00000369462 MYO15BQ96JP2 1530 aa20.94■□□□□ 0.94
BRCC3-204ENST00000369462 NACADO15069 1562 aa20.93■□□□□ 0.94
BRCC3-204ENST00000369462 RB1CC1Q8TDY2 1594 aa20.84■□□□□ 0.93
BRCC3-204ENST00000369462 SHROOM4Q9ULL8 1493 aa20.6■□□□□ 0.89
BRCC3-204ENST00000369462 SCRIBQ14160 1630 aa20.54■□□□□ 0.88
BRCC3-204ENST00000369462 UNC13AQ9UPW8 1703 aa20.36■□□□□ 0.85
BRCC3-204ENST00000369462 PABPN1Q86U42 306 aaKnown RBP eCLIP20.26■□□□□ 0.83
BRCC3-204ENST00000369462 BICRAQ9NZM4 1560 aa20.2■□□□□ 0.82
BRCC3-204ENST00000369462 CECR2Q9BXF3 1484 aa19.85■□□□□ 0.77
BRCC3-204ENST00000369462 BAZ1AQ9NRL2 1556 aaPredicted RBP19.71■□□□□ 0.75
BRCC3-204ENST00000369462 MROH2BQ7Z745 1585 aa19.68■□□□□ 0.74
BRCC3-204ENST00000369462 SUPT5HO00267 1087 aaKnown RBP19.66■□□□□ 0.74
BRCC3-204ENST00000369462 RSF1Q96T23 1441 aaPredicted RBP19.65■□□□□ 0.74
BRCC3-204ENST00000369462 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
BRCC3-204ENST00000369462 EIF4G1Q04637 1599 aaKnown RBP19.64■□□□□ 0.73
BRCC3-204ENST00000369462 WIZO95785 1651 aa19.49■□□□□ 0.71
BRCC3-204ENST00000369462 ATAD2BQ9ULI0 1458 aa19.44■□□□□ 0.7
BRCC3-204ENST00000369462 CC2D2AQ9P2K1 1620 aa19.44■□□□□ 0.7
BRCC3-204ENST00000369462 PEG3Q9GZU2 1588 aa19.42■□□□□ 0.7
BRCC3-204ENST00000369462 SMARCA2P51531 1590 aa19.41■□□□□ 0.7
BRCC3-204ENST00000369462 NCAPD3P42695 1498 aa19.34■□□□□ 0.69
BRCC3-204ENST00000369462 DNAJC5BQ9UF47 199 aa19.33■□□□□ 0.69
BRCC3-204ENST00000369462 BAZ1BQ9UIG0 1483 aaKnown RBP19.32■□□□□ 0.68
BRCC3-204ENST00000369462 TOP2AP11388 1531 aaKnown RBP19.27■□□□□ 0.68
BRCC3-204ENST00000369462 HMGXB3Q12766 1538 aa19.26■□□□□ 0.67
BRCC3-204ENST00000369462 CCDC88BA6NC98 1476 aa19.1■□□□□ 0.65
BRCC3-204ENST00000369462 CADPSQ9ULU8 1353 aa18.84■□□□□ 0.61
BRCC3-204ENST00000369462 CFTRP13569 1480 aa18.81■□□□□ 0.6
BRCC3-204ENST00000369462 NESP48681 1621 aa18.78■□□□□ 0.6
BRCC3-204ENST00000369462 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
BRCC3-204ENST00000369462 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
BRCC3-204ENST00000369462 PRDM2Q13029 1718 aa18.61■□□□□ 0.57
BRCC3-204ENST00000369462 FANCD2Q9BXW9 1451 aa18.61■□□□□ 0.57
BRCC3-204ENST00000369462 CHIC1Q5VXU3 224 aa18.61■□□□□ 0.57
BRCC3-204ENST00000369462 ABCC8Q09428 1581 aa18.58■□□□□ 0.56
BRCC3-204ENST00000369462 CEP164Q9UPV0 1460 aa18.53■□□□□ 0.56
BRCC3-204ENST00000369462 WRNQ14191 1432 aaPredicted RBP eCLIP18.52■□□□□ 0.56
BRCC3-204ENST00000369462 TRIM41Q8WV44 630 aa18.51■□□□□ 0.55
BRCC3-204ENST00000369462 KIF21AQ7Z4S6 1674 aa18.5■□□□□ 0.55
BRCC3-204ENST00000369462 ERCC6Q03468 1493 aa18.5■□□□□ 0.55
BRCC3-204ENST00000369462 CUX1P39880 1505 aa18.42■□□□□ 0.54
BRCC3-204ENST00000369462 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
BRCC3-204ENST00000369462 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.53
BRCC3-204ENST00000369462 MRC2Q9UBG0 1479 aa18.38■□□□□ 0.53
BRCC3-204ENST00000369462 TOP2BQ02880 1626 aa18.37■□□□□ 0.53
BRCC3-204ENST00000369462 TOPBP1Q92547 1522 aa18.37■□□□□ 0.53
BRCC3-204ENST00000369462 DNMBPQ6XZF7 1577 aa18.36■□□□□ 0.53
BRCC3-204ENST00000369462 BIVM-ERCC5R4GMW8 1640 aa18.34■□□□□ 0.53
BRCC3-204ENST00000369462 THOC2Q8NI27 1593 aaKnown RBP18.29■□□□□ 0.52
BRCC3-204ENST00000369462 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
BRCC3-204ENST00000369462 WDR62O43379 1518 aa18.28■□□□□ 0.52
BRCC3-204ENST00000369462 POLA1P09884 1462 aaPredicted RBP18.25■□□□□ 0.51
BRCC3-204ENST00000369462 SOGA1O94964 1423 aa18.21■□□□□ 0.51
BRCC3-204ENST00000369462 RAD54L2Q9Y4B4 1467 aa18.2■□□□□ 0.5
BRCC3-204ENST00000369462 FAM9AQ8IZU1 332 aaPredicted RBP18.17■□□□□ 0.5
BRCC3-204ENST00000369462 CUX2O14529 1486 aa18.17■□□□□ 0.5
BRCC3-204ENST00000369462 RUSC2Q8N2Y8 1516 aa18.12■□□□□ 0.49
BRCC3-204ENST00000369462 ABCA10Q8WWZ4 1543 aa18.11■□□□□ 0.49
BRCC3-204ENST00000369462 IFT140Q96RY7 1462 aa18.1■□□□□ 0.49
BRCC3-204ENST00000369462 TARBP1Q13395 1621 aaKnown RBP18.1■□□□□ 0.49
BRCC3-204ENST00000369462 TDRD9Q8NDG6 1382 aaKnown RBP18.08■□□□□ 0.49
BRCC3-204ENST00000369462 KIF27Q86VH2 1401 aa18.08■□□□□ 0.49
BRCC3-204ENST00000369462 EEA1Q15075 1411 aa18.05■□□□□ 0.48
BRCC3-204ENST00000369462 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
BRCC3-204ENST00000369462 WDR97A6NE52 1622 aa18.03■□□□□ 0.48
BRCC3-204ENST00000369462 CSRNP3Q8WYN3 585 aa18.03■□□□□ 0.48
BRCC3-204ENST00000369462 AQRO60306 1485 aaKnown RBP eCLIP18.02■□□□□ 0.473e-7■■■□□ 19
BRCC3-204ENST00000369462 GAPVD1Q14C86 1478 aa17.99■□□□□ 0.47
BRCC3-204ENST00000369462 IGF1RP08069 1367 aa17.97■□□□□ 0.47
BRCC3-204ENST00000369462 ABCA5Q8WWZ7 1642 aa17.96■□□□□ 0.47
BRCC3-204ENST00000369462 EHMT2Q96KQ7 1210 aa17.94■□□□□ 0.46
BRCC3-204ENST00000369462 EIF4G3O43432 1585 aaKnown RBP17.93■□□□□ 0.46
BRCC3-204ENST00000369462 LOC105371045A0A1W2PR82 267 aa17.9■□□□□ 0.46
BRCC3-204ENST00000369462 GRIN2BQ13224 1484 aa17.9■□□□□ 0.46
BRCC3-204ENST00000369462 ERICH3Q5RHP9 1530 aa17.89■□□□□ 0.45
BRCC3-204ENST00000369462 CARMIL1Q5VZK9 1371 aa17.87■□□□□ 0.45
BRCC3-204ENST00000369462 PBRM1Q86U86 1689 aa17.86■□□□□ 0.45
BRCC3-204ENST00000369462 PRXQ9BXM0 1461 aa17.86■□□□□ 0.45
BRCC3-204ENST00000369462 SNAPC4Q5SXM2 1469 aa17.82■□□□□ 0.44
BRCC3-204ENST00000369462 RAPGEF2Q9Y4G8 1499 aa17.81■□□□□ 0.44
BRCC3-204ENST00000369462 CUL7Q14999 1698 aa17.8■□□□□ 0.44
BRCC3-204ENST00000369462 KIF21BO75037 1637 aa17.8■□□□□ 0.44
BRCC3-204ENST00000369462 FHAD1B1AJZ9 1412 aa17.79■□□□□ 0.44
BRCC3-204ENST00000369462 UBTFP17480 764 aaKnown RBP17.79■□□□□ 0.44
BRCC3-204ENST00000369462 GOLGA3Q08378 1498 aa17.78■□□□□ 0.44
BRCC3-204ENST00000369462 MAGI1Q96QZ7 1491 aaPredicted RBP17.78■□□□□ 0.44
BRCC3-204ENST00000369462 FBLN2P98095 1184 aa17.76■□□□□ 0.43
BRCC3-204ENST00000369462 ADAMTS12P58397 1594 aa17.76■□□□□ 0.43
BRCC3-204ENST00000369462 CHMP7Q8WUX9 453 aaPredicted RBP17.75■□□□□ 0.43
BRCC3-204ENST00000369462 SYNJ2O15056 1496 aa17.72■□□□□ 0.43
BRCC3-204ENST00000369462 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
BRCC3-204ENST00000369462 GRIN2AQ12879 1464 aa17.68■□□□□ 0.42
BRCC3-204ENST00000369462 TNIKQ9UKE5 1360 aa17.67■□□□□ 0.42
BRCC3-204ENST00000369462 RANGAP1P46060 587 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms