RNA–Protein interactions for RNA: ENST00000431210.2

XRRA1-203, Transcript of X-ray radiation resistance associated 1, humanhuman

TSL 2

Gene XRRA1, Length 2,995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1-203ENST00000431210 NISCHQ9Y2I1 1504 aa23.77■■□□□ 1.4
XRRA1-203ENST00000431210 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
XRRA1-203ENST00000431210 SHROOM4Q9ULL8 1493 aa20.59■□□□□ 0.89
XRRA1-203ENST00000431210 CCDC180Q9P1Z9 1646 aa20.08■□□□□ 0.81
XRRA1-203ENST00000431210 SUPT5HO00267 1087 aaKnown RBP20■□□□□ 0.79
XRRA1-203ENST00000431210 ZCCHC6Q5VYS8 1495 aaKnown RBP19.95■□□□□ 0.78
XRRA1-203ENST00000431210 ABCC9O60706 1549 aa19.64■□□□□ 0.73
XRRA1-203ENST00000431210 SCRIBQ14160 1630 aa19.23■□□□□ 0.67
XRRA1-203ENST00000431210 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
XRRA1-203ENST00000431210 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
XRRA1-203ENST00000431210 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.62
XRRA1-203ENST00000431210 NACADO15069 1562 aa18.82■□□□□ 0.6
XRRA1-203ENST00000431210 CECR2Q9BXF3 1484 aa18.81■□□□□ 0.6
XRRA1-203ENST00000431210 RSF1Q96T23 1441 aaPredicted RBP18.77■□□□□ 0.6
XRRA1-203ENST00000431210 MYO15BQ96JP2 1530 aa18.75■□□□□ 0.59
XRRA1-203ENST00000431210 EHMT2Q96KQ7 1210 aa18.71■□□□□ 0.59
XRRA1-203ENST00000431210 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
XRRA1-203ENST00000431210 LOC105371045A0A1W2PR82 267 aa18.63■□□□□ 0.57
XRRA1-203ENST00000431210 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
XRRA1-203ENST00000431210 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
XRRA1-203ENST00000431210 TRIM41Q8WV44 630 aa18.48■□□□□ 0.55
XRRA1-203ENST00000431210 WIZO95785 1651 aa18.44■□□□□ 0.54
XRRA1-203ENST00000431210 UNC13AQ9UPW8 1703 aa18.34■□□□□ 0.53
XRRA1-203ENST00000431210 BAZ1AQ9NRL2 1556 aaPredicted RBP18.24■□□□□ 0.51
XRRA1-203ENST00000431210 BICRAQ9NZM4 1560 aa18.23■□□□□ 0.51
XRRA1-203ENST00000431210 PCGF6Q9BYE7 350 aa18.15■□□□□ 0.5
XRRA1-203ENST00000431210 SMARCA4P51532 1647 aa18.14■□□□□ 0.5
XRRA1-203ENST00000431210 CCDC88BA6NC98 1476 aa18.09■□□□□ 0.49
XRRA1-203ENST00000431210 PPARGC1BQ86YN6 1023 aaKnown RBP18.04■□□□□ 0.48
XRRA1-203ENST00000431210 ABCC8Q09428 1581 aa18.01■□□□□ 0.47
XRRA1-203ENST00000431210 TOP2AP11388 1531 aaKnown RBP17.98■□□□□ 0.47
XRRA1-203ENST00000431210 SMARCA2P51531 1590 aa17.93■□□□□ 0.46
XRRA1-203ENST00000431210 TTBK1Q5TCY1 1321 aaPredicted RBP17.92■□□□□ 0.46
XRRA1-203ENST00000431210 ATAD2BQ9ULI0 1458 aa17.9■□□□□ 0.46
XRRA1-203ENST00000431210 BAZ1BQ9UIG0 1483 aaKnown RBP17.86■□□□□ 0.45
XRRA1-203ENST00000431210 RANGAP1P46060 587 aaPredicted RBP17.85■□□□□ 0.45
XRRA1-203ENST00000431210 SOGA1O94964 1423 aa17.8■□□□□ 0.44
XRRA1-203ENST00000431210 RUSC2Q8N2Y8 1516 aa17.76■□□□□ 0.43
XRRA1-203ENST00000431210 UBTFP17480 764 aaKnown RBP17.76■□□□□ 0.43
XRRA1-203ENST00000431210 EIF4G1Q04637 1599 aaKnown RBP17.72■□□□□ 0.43
XRRA1-203ENST00000431210 WRNQ14191 1432 aaPredicted RBP eCLIP17.67■□□□□ 0.42
XRRA1-203ENST00000431210 CSRNP3Q8WYN3 585 aa17.65■□□□□ 0.42
XRRA1-203ENST00000431210 DNAJC5BQ9UF47 199 aa17.63■□□□□ 0.41
XRRA1-203ENST00000431210 PEG3Q9GZU2 1588 aa17.63■□□□□ 0.41
XRRA1-203ENST00000431210 TRIM26Q12899 539 aaPredicted RBP17.62■□□□□ 0.41
XRRA1-203ENST00000431210 HRCP23327 699 aa17.56■□□□□ 0.4
XRRA1-203ENST00000431210 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
XRRA1-203ENST00000431210 NCAPD3P42695 1498 aa17.53■□□□□ 0.4
XRRA1-203ENST00000431210 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
XRRA1-203ENST00000431210 CEP162Q5TB80 1403 aa17.41■□□□□ 0.38
XRRA1-203ENST00000431210 HMGXB3Q12766 1538 aa17.36■□□□□ 0.37
XRRA1-203ENST00000431210 NESP48681 1621 aa17.33■□□□□ 0.37
XRRA1-203ENST00000431210 RAPGEF2Q9Y4G8 1499 aa17.32■□□□□ 0.36
XRRA1-203ENST00000431210 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
XRRA1-203ENST00000431210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.31■□□□□ 0.36
XRRA1-203ENST00000431210 CFTRP13569 1480 aa17.31■□□□□ 0.36
XRRA1-203ENST00000431210 TNIKQ9UKE5 1360 aa17.3■□□□□ 0.36
XRRA1-203ENST00000431210 CUX1P39880 1505 aa17.29■□□□□ 0.36
XRRA1-203ENST00000431210 GOLGA3Q08378 1498 aa17.27■□□□□ 0.36
XRRA1-203ENST00000431210 EEA1Q15075 1411 aa17.25■□□□□ 0.35
XRRA1-203ENST00000431210 TOP2BQ02880 1626 aa17.21■□□□□ 0.35
XRRA1-203ENST00000431210 CEP164Q9UPV0 1460 aa17.2■□□□□ 0.34
XRRA1-203ENST00000431210 CLIP1P30622 1438 aa17.2■□□□□ 0.34
XRRA1-203ENST00000431210 P3H3Q8IVL6 736 aa17.19■□□□□ 0.34
XRRA1-203ENST00000431210 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
XRRA1-203ENST00000431210 CUX2O14529 1486 aa17.16■□□□□ 0.34
XRRA1-203ENST00000431210 APLP2Q06481 763 aa17.16■□□□□ 0.34
XRRA1-203ENST00000431210 FANCD2Q9BXW9 1451 aa17.15■□□□□ 0.34
XRRA1-203ENST00000431210 ATP1B4Q9UN42 357 aaPredicted RBP17.14■□□□□ 0.33
XRRA1-203ENST00000431210 CCER1Q8TC90 406 aaPredicted RBP17.14■□□□□ 0.33
XRRA1-203ENST00000431210 KIF27Q86VH2 1401 aa17.13■□□□□ 0.33
XRRA1-203ENST00000431210 RAD54L2Q9Y4B4 1467 aa17.13■□□□□ 0.33
XRRA1-203ENST00000431210 FGD5Q6ZNL6 1462 aa17.1■□□□□ 0.33
XRRA1-203ENST00000431210 IGF1RP08069 1367 aa17.05■□□□□ 0.32
XRRA1-203ENST00000431210 BIVM-ERCC5R4GMW8 1640 aa17.05■□□□□ 0.32
XRRA1-203ENST00000431210 TDRD9Q8NDG6 1382 aaKnown RBP17.04■□□□□ 0.32
XRRA1-203ENST00000431210 KANK4Q5T7N3 995 aaPredicted RBP17.03■□□□□ 0.32
XRRA1-203ENST00000431210 PRXQ9BXM0 1461 aa17.02■□□□□ 0.31
XRRA1-203ENST00000431210 ITGAEP38570 1179 aa17.01■□□□□ 0.31
XRRA1-203ENST00000431210 KIF21BO75037 1637 aa17.01■□□□□ 0.31
XRRA1-203ENST00000431210 CARMIL1Q5VZK9 1371 aa17■□□□□ 0.31
XRRA1-203ENST00000431210 VPS8Q8N3P4 1428 aa16.96■□□□□ 0.31
XRRA1-203ENST00000431210 POLA1P09884 1462 aaPredicted RBP16.94■□□□□ 0.3
XRRA1-203ENST00000431210 TOPBP1Q92547 1522 aa16.94■□□□□ 0.3
XRRA1-203ENST00000431210 ARAP1Q96P48 1450 aa16.93■□□□□ 0.3
XRRA1-203ENST00000431210 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
XRRA1-203ENST00000431210 ARID3CA6NKF2 412 aa16.89■□□□□ 0.3
XRRA1-203ENST00000431210 PDS5BQ9NTI5 1447 aa16.86■□□□□ 0.29
XRRA1-203ENST00000431210 ZEB1P37275 1124 aaPredicted RBP16.86■□□□□ 0.29
XRRA1-203ENST00000431210 ARHGAP35Q9NRY4 1499 aa16.83■□□□□ 0.29
XRRA1-203ENST00000431210 ERICH3Q5RHP9 1530 aa16.82■□□□□ 0.28
XRRA1-203ENST00000431210 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
XRRA1-203ENST00000431210 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.28
XRRA1-203ENST00000431210 PRDM2Q13029 1718 aa16.79■□□□□ 0.28
XRRA1-203ENST00000431210 FBLN2P98095 1184 aa16.79■□□□□ 0.28
XRRA1-203ENST00000431210 FHOD3Q2V2M9 1422 aa16.78■□□□□ 0.28
XRRA1-203ENST00000431210 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.28
XRRA1-203ENST00000431210 KIF21AQ7Z4S6 1674 aa16.76■□□□□ 0.27
XRRA1-203ENST00000431210 ABCA10Q8WWZ4 1543 aa16.74■□□□□ 0.27
XRRA1-203ENST00000431210 FAM50AQ14320 339 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms