RNA–Protein interactions for RNA: ENST00000454792.2

PYM1-204, Transcript of PYM homolog 1, exon junction complex associated factor, humanhuman

TSL 2 BASIC

Gene PYM1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYM1-204ENST00000454792 AEBP2Q6ZN18 517 aaPredicted RBP22.32■■□□□ 1.16
PYM1-204ENST00000454792 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
PYM1-204ENST00000454792 NISCHQ9Y2I1 1504 aa19.38■□□□□ 0.69
PYM1-204ENST00000454792 SENP3Q9H4L4 574 aaPredicted RBP19.3■□□□□ 0.68
PYM1-204ENST00000454792 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
PYM1-204ENST00000454792 FOXD1Q16676 465 aa17.87■□□□□ 0.45
PYM1-204ENST00000454792 ABCC9O60706 1549 aa17.7■□□□□ 0.42
PYM1-204ENST00000454792 CCDC180Q9P1Z9 1646 aa17.37■□□□□ 0.37
PYM1-204ENST00000454792 MSH5O43196 834 aa16.99■□□□□ 0.31
PYM1-204ENST00000454792 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
PYM1-204ENST00000454792 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
PYM1-204ENST00000454792 PIAS4Q8N2W9 510 aaPredicted RBP16.73■□□□□ 0.27
PYM1-204ENST00000454792 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
PYM1-204ENST00000454792 DCAF8L2P0C7V8 631 aa16.7■□□□□ 0.26
PYM1-204ENST00000454792 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
PYM1-204ENST00000454792 NACADO15069 1562 aa16.55■□□□□ 0.24
PYM1-204ENST00000454792 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
PYM1-204ENST00000454792 PPP6R1Q9UPN7 881 aa16.46■□□□□ 0.23
PYM1-204ENST00000454792 ADRA2BP18089 450 aa16.44■□□□□ 0.22
PYM1-204ENST00000454792 MYO15BQ96JP2 1530 aa16.22■□□□□ 0.19
PYM1-204ENST00000454792 BICRAQ9NZM4 1560 aa16.13■□□□□ 0.17
PYM1-204ENST00000454792 UNC13AQ9UPW8 1703 aa16.12■□□□□ 0.17
PYM1-204ENST00000454792 ZCCHC6Q5VYS8 1495 aaKnown RBP16.01■□□□□ 0.15
PYM1-204ENST00000454792 SHROOM4Q9ULL8 1493 aa15.98■□□□□ 0.15
PYM1-204ENST00000454792 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.14
PYM1-204ENST00000454792 DCAF1Q9Y4B6 1507 aa15.95■□□□□ 0.14
PYM1-204ENST00000454792 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
PYM1-204ENST00000454792 CC2D2AQ9P2K1 1620 aa15.89■□□□□ 0.13
PYM1-204ENST00000454792 EIF4G1Q04637 1599 aaKnown RBP15.82■□□□□ 0.12
PYM1-204ENST00000454792 DNAJC5Q9H3Z4 198 aa15.52■□□□□ 0.08
PYM1-204ENST00000454792 ERCC6Q03468 1493 aa15.37■□□□□ 0.05
PYM1-204ENST00000454792 CUX2O14529 1486 aa15.3■□□□□ 0.04
PYM1-204ENST00000454792 SCAF1Q9H7N4 1312 aaKnown RBP15.3■□□□□ 0.04
PYM1-204ENST00000454792 NCAPD3P42695 1498 aa15.29■□□□□ 0.04
PYM1-204ENST00000454792 ATAD2BQ9ULI0 1458 aa15.23■□□□□ 0.03
PYM1-204ENST00000454792 DMRT2Q9Y5R5 561 aa15.21■□□□□ 0.03
PYM1-204ENST00000454792 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
PYM1-204ENST00000454792 HMGXB3Q12766 1538 aa15.13■□□□□ 0.01
PYM1-204ENST00000454792 MAPK8IP2Q13387 824 aaPredicted RBP15.12■□□□□ 0.01
PYM1-204ENST00000454792 BAZ1BQ9UIG0 1483 aaKnown RBP15.12■□□□□ 0.01
PYM1-204ENST00000454792 SMARCA4P51532 1647 aa15.11■□□□□ 0.01
PYM1-204ENST00000454792 NESP48681 1621 aa15.1■□□□□ 0.01
PYM1-204ENST00000454792 BAZ1AQ9NRL2 1556 aaPredicted RBP15.08■□□□□ 0
PYM1-204ENST00000454792 PDS5BQ9NTI5 1447 aa14.99□□□□□ -0.01
PYM1-204ENST00000454792 LAMC3Q9Y6N6 1575 aa14.95□□□□□ -0.02
PYM1-204ENST00000454792 MROH2BQ7Z745 1585 aa14.93□□□□□ -0.02
PYM1-204ENST00000454792 PEG3Q9GZU2 1588 aa14.93□□□□□ -0.02
PYM1-204ENST00000454792 THOC2Q8NI27 1593 aaKnown RBP14.9□□□□□ -0.02
PYM1-204ENST00000454792 TRIM41Q8WV44 630 aa14.89□□□□□ -0.03
PYM1-204ENST00000454792 CADPSQ9ULU8 1353 aa14.88□□□□□ -0.03
PYM1-204ENST00000454792 MRC2Q9UBG0 1479 aa14.81□□□□□ -0.04
PYM1-204ENST00000454792 KIF21AQ7Z4S6 1674 aa14.8□□□□□ -0.04
PYM1-204ENST00000454792 CEP164Q9UPV0 1460 aa14.74□□□□□ -0.05
PYM1-204ENST00000454792 WDR62O43379 1518 aa14.71□□□□□ -0.06
PYM1-204ENST00000454792 WIZO95785 1651 aa14.7□□□□□ -0.06
PYM1-204ENST00000454792 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
PYM1-204ENST00000454792 OSCARQ8IYS5 282 aa14.69□□□□□ -0.06
PYM1-204ENST00000454792 CACNB1Q02641 598 aaPredicted RBP14.68□□□□□ -0.06
PYM1-204ENST00000454792 PPP4R3CPQ6ZMV5 832 aa14.65□□□□□ -0.06
PYM1-204ENST00000454792 DCAF8L1A6NGE4 600 aa14.64□□□□□ -0.07
PYM1-204ENST00000454792 CFTRP13569 1480 aa14.62□□□□□ -0.07
PYM1-204ENST00000454792 RSF1Q96T23 1441 aaPredicted RBP14.59□□□□□ -0.07
PYM1-204ENST00000454792 HOXD11P31277 338 aaPredicted RBP14.55□□□□□ -0.08
PYM1-204ENST00000454792 TOP2AP11388 1531 aaKnown RBP14.55□□□□□ -0.08
PYM1-204ENST00000454792 URB2Q14146 1524 aaKnown RBP14.53□□□□□ -0.08
PYM1-204ENST00000454792 CNKSR2Q8WXI2 1034 aa14.5□□□□□ -0.09
PYM1-204ENST00000454792 IFT140Q96RY7 1462 aa14.45□□□□□ -0.1
PYM1-204ENST00000454792 RNF216Q9NWF9 866 aaPredicted RBP14.42□□□□□ -0.1
PYM1-204ENST00000454792 CCDC88BA6NC98 1476 aa14.41□□□□□ -0.1
PYM1-204ENST00000454792 FBLN2P98095 1184 aa14.4□□□□□ -0.1
PYM1-204ENST00000454792 ZNF608Q9ULD9 1512 aaPredicted RBP14.4□□□□□ -0.1
PYM1-204ENST00000454792 RNF39Q9H2S5 420 aa14.38□□□□□ -0.11
PYM1-204ENST00000454792 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
PYM1-204ENST00000454792 TOPBP1Q92547 1522 aa14.36□□□□□ -0.11
PYM1-204ENST00000454792 CYB5RLQ6IPT4 315 aa14.36□□□□□ -0.11
PYM1-204ENST00000454792 RIMBP3CA6NJZ7 1639 aa14.33□□□□□ -0.11
PYM1-204ENST00000454792 RIMBP3BA6NNM3 1639 aa14.33□□□□□ -0.11
PYM1-204ENST00000454792 RIMBP3Q9UFD9 1639 aa14.33□□□□□ -0.11
PYM1-204ENST00000454792 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
PYM1-204ENST00000454792 ARHGEF11O15085 1522 aa14.32□□□□□ -0.12
PYM1-204ENST00000454792 AQRO60306 1485 aaKnown RBP eCLIP14.3□□□□□ -0.121e-6■■■■■ 33.8
PYM1-204ENST00000454792 PRDM2Q13029 1718 aa14.28□□□□□ -0.12
PYM1-204ENST00000454792 DNMBPQ6XZF7 1577 aa14.28□□□□□ -0.12
PYM1-204ENST00000454792 EIF4G3O43432 1585 aaKnown RBP14.26□□□□□ -0.13
PYM1-204ENST00000454792 C1QBPQ07021 282 aaKnown RBP14.25□□□□□ -0.13
PYM1-204ENST00000454792 CHMP7Q8WUX9 453 aaPredicted RBP14.22□□□□□ -0.13
PYM1-204ENST00000454792 SOGA1O94964 1423 aa14.22□□□□□ -0.13
PYM1-204ENST00000454792 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
PYM1-204ENST00000454792 POLA1P09884 1462 aaPredicted RBP14.21□□□□□ -0.13
PYM1-204ENST00000454792 RAD54L2Q9Y4B4 1467 aa14.18□□□□□ -0.14
PYM1-204ENST00000454792 NCBP3Q53F19 620 aaKnown RBP14.18□□□□□ -0.14
PYM1-204ENST00000454792 TARBP1Q13395 1621 aaKnown RBP14.16□□□□□ -0.14
PYM1-204ENST00000454792 ARAP1Q96P48 1450 aa14.16□□□□□ -0.14
PYM1-204ENST00000454792 SNAPC4Q5SXM2 1469 aa14.13□□□□□ -0.15
PYM1-204ENST00000454792 CHD1O14646 1710 aa14.13□□□□□ -0.15
PYM1-204ENST00000454792 FGD5Q6ZNL6 1462 aa14.12□□□□□ -0.15
PYM1-204ENST00000454792 GRIN2BQ13224 1484 aa14.09□□□□□ -0.15
PYM1-204ENST00000454792 MAGI1Q96QZ7 1491 aaPredicted RBP14.07□□□□□ -0.16
PYM1-204ENST00000454792 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
PYM1-204ENST00000454792 WDR97A6NE52 1622 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms