RNA–Protein interactions for RNA: ENST00000207870.7

XYLB-201, Transcript of xylulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XYLB, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XYLB-201ENST00000207870 NISCHQ9Y2I1 1504 aa21.05■□□□□ 0.96
XYLB-201ENST00000207870 DCAF8L2P0C7V8 631 aa19.19■□□□□ 0.66
XYLB-201ENST00000207870 SHROOM4Q9ULL8 1493 aa19.11■□□□□ 0.65
XYLB-201ENST00000207870 SUPT5HO00267 1087 aaKnown RBP18.74■□□□□ 0.59
XYLB-201ENST00000207870 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
XYLB-201ENST00000207870 ZCCHC6Q5VYS8 1495 aaKnown RBP17.64■□□□□ 0.41
XYLB-201ENST00000207870 FAM9AQ8IZU1 332 aaPredicted RBP17.53■□□□□ 0.4
XYLB-201ENST00000207870 ABCC9O60706 1549 aa17.52■□□□□ 0.4
XYLB-201ENST00000207870 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
XYLB-201ENST00000207870 CCDC180Q9P1Z9 1646 aa17.46■□□□□ 0.39
XYLB-201ENST00000207870 LOC105371045A0A1W2PR82 267 aa17.44■□□□□ 0.38
XYLB-201ENST00000207870 PCGF6Q9BYE7 350 aa17.32■□□□□ 0.36
XYLB-201ENST00000207870 MYO15BQ96JP2 1530 aa17.21■□□□□ 0.35
XYLB-201ENST00000207870 SCRIBQ14160 1630 aa17.19■□□□□ 0.34
XYLB-201ENST00000207870 TRIM41Q8WV44 630 aa17.15■□□□□ 0.34
XYLB-201ENST00000207870 PPARGC1BQ86YN6 1023 aaKnown RBP17.13■□□□□ 0.33
XYLB-201ENST00000207870 TTBK1Q5TCY1 1321 aaPredicted RBP17.12■□□□□ 0.33
XYLB-201ENST00000207870 PABPN1Q86U42 306 aaKnown RBP eCLIP17.12■□□□□ 0.33
XYLB-201ENST00000207870 RANGAP1P46060 587 aaPredicted RBP16.87■□□□□ 0.29
XYLB-201ENST00000207870 CECR2Q9BXF3 1484 aa16.83■□□□□ 0.28
XYLB-201ENST00000207870 RSF1Q96T23 1441 aaPredicted RBP16.82■□□□□ 0.28
XYLB-201ENST00000207870 DCAF1Q9Y4B6 1507 aa16.78■□□□□ 0.28
XYLB-201ENST00000207870 HRCP23327 699 aa16.66■□□□□ 0.26
XYLB-201ENST00000207870 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
XYLB-201ENST00000207870 UBTFP17480 764 aaKnown RBP16.57■□□□□ 0.24
XYLB-201ENST00000207870 MROH2BQ7Z745 1585 aa16.57■□□□□ 0.24
XYLB-201ENST00000207870 TRIM26Q12899 539 aaPredicted RBP16.52■□□□□ 0.24
XYLB-201ENST00000207870 NACADO15069 1562 aa16.45■□□□□ 0.22
XYLB-201ENST00000207870 WIZO95785 1651 aa16.44■□□□□ 0.22
XYLB-201ENST00000207870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.39■□□□□ 0.21
XYLB-201ENST00000207870 CCER1Q8TC90 406 aaPredicted RBP16.3■□□□□ 0.2
XYLB-201ENST00000207870 ABCC8Q09428 1581 aa16.28■□□□□ 0.2
XYLB-201ENST00000207870 HNRNPUL2Q1KMD3 747 aaKnown RBP16.21■□□□□ 0.18
XYLB-201ENST00000207870 SOGA1O94964 1423 aa16.18■□□□□ 0.18
XYLB-201ENST00000207870 CCDC88BA6NC98 1476 aa16.17■□□□□ 0.18
XYLB-201ENST00000207870 CSRNP3Q8WYN3 585 aa16.17■□□□□ 0.18
XYLB-201ENST00000207870 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
XYLB-201ENST00000207870 ATP1B4Q9UN42 357 aaPredicted RBP16.14■□□□□ 0.17
XYLB-201ENST00000207870 APLP2Q06481 763 aa16.13■□□□□ 0.17
XYLB-201ENST00000207870 RUSC2Q8N2Y8 1516 aa16.1■□□□□ 0.17
XYLB-201ENST00000207870 ITGAEP38570 1179 aa16.08■□□□□ 0.16
XYLB-201ENST00000207870 SMARCA4P51532 1647 aa16■□□□□ 0.15
XYLB-201ENST00000207870 P3H3Q8IVL6 736 aa15.96■□□□□ 0.15
XYLB-201ENST00000207870 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.146e-6■■■□□ 16.7
XYLB-201ENST00000207870 BAZ1BQ9UIG0 1483 aaKnown RBP15.94■□□□□ 0.14
XYLB-201ENST00000207870 CEP162Q5TB80 1403 aa15.92■□□□□ 0.14
XYLB-201ENST00000207870 TOP2AP11388 1531 aaKnown RBP15.92■□□□□ 0.14
XYLB-201ENST00000207870 ZEB1P37275 1124 aaPredicted RBP15.92■□□□□ 0.14
XYLB-201ENST00000207870 SMARCA2P51531 1590 aa15.89■□□□□ 0.13
XYLB-201ENST00000207870 YTHDC1Q96MU7 727 aaKnown RBP15.87■□□□□ 0.13
XYLB-201ENST00000207870 UNC13AQ9UPW8 1703 aa15.87■□□□□ 0.13
XYLB-201ENST00000207870 BICRAQ9NZM4 1560 aa15.85■□□□□ 0.13
XYLB-201ENST00000207870 ATAD2BQ9ULI0 1458 aa15.83■□□□□ 0.12
XYLB-201ENST00000207870 ARID3CA6NKF2 412 aa15.77■□□□□ 0.12
XYLB-201ENST00000207870 CLIP1P30622 1438 aa15.73■□□□□ 0.11
XYLB-201ENST00000207870 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
XYLB-201ENST00000207870 TNIKQ9UKE5 1360 aa15.71■□□□□ 0.11
XYLB-201ENST00000207870 DIEXFQ68CQ4 756 aaKnown RBP15.68■□□□□ 0.1
XYLB-201ENST00000207870 GOLGA3Q08378 1498 aa15.68■□□□□ 0.1
XYLB-201ENST00000207870 RAPGEF2Q9Y4G8 1499 aa15.68■□□□□ 0.1
XYLB-201ENST00000207870 KANK4Q5T7N3 995 aaPredicted RBP15.65■□□□□ 0.1
XYLB-201ENST00000207870 SYNJ1O43426 1573 aa15.64■□□□□ 0.09
XYLB-201ENST00000207870 FAM50AQ14320 339 aaKnown RBP15.64■□□□□ 0.09
XYLB-201ENST00000207870 CEP164Q9UPV0 1460 aa15.56■□□□□ 0.08
XYLB-201ENST00000207870 NEUROD1Q13562 356 aa15.55■□□□□ 0.08
XYLB-201ENST00000207870 EIF4G1Q04637 1599 aaKnown RBP15.54■□□□□ 0.08
XYLB-201ENST00000207870 EEA1Q15075 1411 aa15.53■□□□□ 0.08
XYLB-201ENST00000207870 CUX2O14529 1486 aa15.5■□□□□ 0.07
XYLB-201ENST00000207870 FBLN2P98095 1184 aa15.47■□□□□ 0.07
XYLB-201ENST00000207870 HIRIP3Q9BW71 556 aaPredicted RBP15.46■□□□□ 0.07
XYLB-201ENST00000207870 KIF27Q86VH2 1401 aa15.46■□□□□ 0.06
XYLB-201ENST00000207870 ZNF316A6NFI3 1004 aaPredicted RBP15.44■□□□□ 0.06
XYLB-201ENST00000207870 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
XYLB-201ENST00000207870 NESP48681 1621 aa15.42■□□□□ 0.06
XYLB-201ENST00000207870 VPS8Q8N3P4 1428 aa15.42■□□□□ 0.06
XYLB-201ENST00000207870 TDRD9Q8NDG6 1382 aaKnown RBP15.41■□□□□ 0.06
XYLB-201ENST00000207870 CNGB1Q14028 1251 aaPredicted RBP15.39■□□□□ 0.05
XYLB-201ENST00000207870 MIER1Q8N108 512 aa15.39■□□□□ 0.05
XYLB-201ENST00000207870 CADPSQ9ULU8 1353 aa15.38■□□□□ 0.05
XYLB-201ENST00000207870 NCAPD3P42695 1498 aa15.38■□□□□ 0.05
XYLB-201ENST00000207870 CARMIL1Q5VZK9 1371 aa15.37■□□□□ 0.05
XYLB-201ENST00000207870 RAD54L2Q9Y4B4 1467 aa15.37■□□□□ 0.05
XYLB-201ENST00000207870 CUX1P39880 1505 aa15.36■□□□□ 0.05
XYLB-201ENST00000207870 GTF3C3Q9Y5Q9 886 aa15.36■□□□□ 0.05
XYLB-201ENST00000207870 CHIC2Q9UKJ5 165 aa15.35■□□□□ 0.05
XYLB-201ENST00000207870 CENPBP07199 599 aaPredicted RBP15.33■□□□□ 0.05
XYLB-201ENST00000207870 SIN3AQ96ST3 1273 aa15.32■□□□□ 0.04
XYLB-201ENST00000207870 PEG3Q9GZU2 1588 aa15.31■□□□□ 0.04
XYLB-201ENST00000207870 IGF1RP08069 1367 aa15.3■□□□□ 0.04
XYLB-201ENST00000207870 KIF21BO75037 1637 aa15.3■□□□□ 0.04
XYLB-201ENST00000207870 ARAP1Q96P48 1450 aa15.29■□□□□ 0.04
XYLB-201ENST00000207870 FGD5Q6ZNL6 1462 aa15.28■□□□□ 0.04
XYLB-201ENST00000207870 CFTRP13569 1480 aa15.27■□□□□ 0.04
XYLB-201ENST00000207870 CC2D2AQ9P2K1 1620 aa15.26■□□□□ 0.03
XYLB-201ENST00000207870 FHOD3Q2V2M9 1422 aa15.26■□□□□ 0.03
XYLB-201ENST00000207870 FANCD2Q9BXW9 1451 aa15.26■□□□□ 0.03
XYLB-201ENST00000207870 ACIN1Q9UKV3 1341 aaKnown RBP15.25■□□□□ 0.03
XYLB-201ENST00000207870 TOP2BQ02880 1626 aa15.24■□□□□ 0.03
XYLB-201ENST00000207870 TRIM52Q96A61 297 aa15.24■□□□□ 0.03
XYLB-201ENST00000207870 RRP7BPQ9NSQ0 103 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms