Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
LTAP01374 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
LTAP01374 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.44■□□□□ 0.06
LTAP01374 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.44■□□□□ 0.06
LTAP01374 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.44■□□□□ 0.06
LTAP01374 DUX4L19-201ENST00000557448 1267 ntBASIC15.44■□□□□ 0.06
LTAP01374 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
LTAP01374 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.44■□□□□ 0.06
LTAP01374 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.44■□□□□ 0.06
LTAP01374 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LTAP01374 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LTAP01374 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.44■□□□□ 0.06
LTAP01374 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LTAP01374 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.44■□□□□ 0.06
LTAP01374 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LTAP01374 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LTAP01374 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LTAP01374 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.44■□□□□ 0.06
LTAP01374 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
LTAP01374 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
LTAP01374 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LTAP01374 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LTAP01374 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.43■□□□□ 0.06
LTAP01374 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LTAP01374 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LTAP01374 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LTAP01374 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LTAP01374 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LTAP01374 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
LTAP01374 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.43■□□□□ 0.06
LTAP01374 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.43■□□□□ 0.06
LTAP01374 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LTAP01374 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LTAP01374 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.43■□□□□ 0.06
LTAP01374 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LTAP01374 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.43■□□□□ 0.06
LTAP01374 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
LTAP01374 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LTAP01374 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.42■□□□□ 0.06
LTAP01374 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
LTAP01374 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LTAP01374 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LTAP01374 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LTAP01374 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.42■□□□□ 0.06
LTAP01374 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LTAP01374 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.42■□□□□ 0.06
LTAP01374 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LTAP01374 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LTAP01374 AL158211.5-201ENST00000623583 2518 ntBASIC15.42■□□□□ 0.06
LTAP01374 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
LTAP01374 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LTAP01374 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LTAP01374 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.42■□□□□ 0.06
LTAP01374 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
LTAP01374 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.42■□□□□ 0.06
LTAP01374 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LTAP01374 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.42■□□□□ 0.06
LTAP01374 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LTAP01374 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LTAP01374 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LTAP01374 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.41■□□□□ 0.06
LTAP01374 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LTAP01374 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LTAP01374 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.41■□□□□ 0.06
LTAP01374 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LTAP01374 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LTAP01374 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.41■□□□□ 0.06
LTAP01374 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LTAP01374 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LTAP01374 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.41■□□□□ 0.06
LTAP01374 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.41■□□□□ 0.06
LTAP01374 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LTAP01374 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.41■□□□□ 0.06
LTAP01374 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.41■□□□□ 0.06
LTAP01374 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LTAP01374 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LTAP01374 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LTAP01374 AL512631.2-201ENST00000604634 923 ntBASIC15.41■□□□□ 0.06
LTAP01374 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.41■□□□□ 0.06
LTAP01374 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.41■□□□□ 0.06
LTAP01374 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LTAP01374 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LTAP01374 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.41■□□□□ 0.06
LTAP01374 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LTAP01374 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.41■□□□□ 0.06
LTAP01374 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.41■□□□□ 0.06
LTAP01374 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LTAP01374 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LTAP01374 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.41■□□□□ 0.06
LTAP01374 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
LTAP01374 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LTAP01374 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LTAP01374 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
LTAP01374 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.4■□□□□ 0.06
LTAP01374 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LTAP01374 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LTAP01374 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LTAP01374 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.4■□□□□ 0.06
LTAP01374 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.4■□□□□ 0.06
LTAP01374 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms