Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF556Q9HAH1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19■□□□□ 0.63
ZNF556Q9HAH1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF556Q9HAH1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF556Q9HAH1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF556Q9HAH1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ZNF556Q9HAH1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF556Q9HAH1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF556Q9HAH1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF556Q9HAH1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19■□□□□ 0.63
ZNF556Q9HAH1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF556Q9HAH1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ZNF556Q9HAH1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19■□□□□ 0.63
ZNF556Q9HAH1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19■□□□□ 0.63
ZNF556Q9HAH1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ZNF556Q9HAH1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF556Q9HAH1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF556Q9HAH1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ZNF556Q9HAH1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19■□□□□ 0.63
ZNF556Q9HAH1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19■□□□□ 0.63
ZNF556Q9HAH1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19■□□□□ 0.63
ZNF556Q9HAH1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF556Q9HAH1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19■□□□□ 0.63
ZNF556Q9HAH1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19■□□□□ 0.63
ZNF556Q9HAH1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF556Q9HAH1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.98■□□□□ 0.63
ZNF556Q9HAH1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF556Q9HAH1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF556Q9HAH1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF556Q9HAH1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF556Q9HAH1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.97■□□□□ 0.63
ZNF556Q9HAH1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF556Q9HAH1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF556Q9HAH1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ZNF556Q9HAH1 AL512408.1-201ENST00000569378 2000 ntBASIC18.97■□□□□ 0.63
ZNF556Q9HAH1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF556Q9HAH1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF556Q9HAH1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF556Q9HAH1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF556Q9HAH1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF556Q9HAH1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF556Q9HAH1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF556Q9HAH1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.96■□□□□ 0.63
ZNF556Q9HAH1 AL162377.1-201ENST00000618844 1793 ntBASIC18.96■□□□□ 0.63
ZNF556Q9HAH1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ZNF556Q9HAH1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF556Q9HAH1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ZNF556Q9HAH1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF556Q9HAH1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.96■□□□□ 0.63
ZNF556Q9HAH1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.96■□□□□ 0.63
ZNF556Q9HAH1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms