Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTN4IP1Q8WWV3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTN4IP1Q8WWV3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.27■□□□□ 0.36
RTN4IP1Q8WWV3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RTN4IP1Q8WWV3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.27■□□□□ 0.35
RTN4IP1Q8WWV3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.27■□□□□ 0.35
RTN4IP1Q8WWV3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTN4IP1Q8WWV3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN4IP1Q8WWV3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 AC020907.5-201ENST00000624372 1936 ntBASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 MIR6084-201ENST00000622012 110 ntBASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 AC007225.1-201ENST00000566331 1836 ntBASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 AC055733.4-201ENST00000638462 1354 ntBASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RTN4IP1Q8WWV3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN4IP1Q8WWV3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.23■□□□□ 0.35
RTN4IP1Q8WWV3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms