Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PCP4P48539 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC14.31□□□□□ -0.12
PCP4P48539 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PCP4P48539 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PCP4P48539 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.31□□□□□ -0.12
PCP4P48539 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 AC135776.1-201ENST00000319817 2481 ntBASIC14.31□□□□□ -0.12
PCP4P48539 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
PCP4P48539 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.31□□□□□ -0.12
PCP4P48539 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.31□□□□□ -0.12
PCP4P48539 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
PCP4P48539 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCP4P48539 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCP4P48539 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCP4P48539 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
PCP4P48539 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
PCP4P48539 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCP4P48539 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCP4P48539 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCP4P48539 SHD-204ENST00000599689 1729 ntTSL 5 BASIC14.3□□□□□ -0.12
PCP4P48539 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC14.3□□□□□ -0.12
PCP4P48539 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
PCP4P48539 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCP4P48539 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCP4P48539 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCP4P48539 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCP4P48539 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCP4P48539 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCP4P48539 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCP4P48539 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCP4P48539 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PCP4P48539 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PCP4P48539 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.3□□□□□ -0.12
PCP4P48539 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCP4P48539 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PCP4P48539 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PCP4P48539 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PCP4P48539 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.29□□□□□ -0.12
PCP4P48539 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PCP4P48539 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC14.29□□□□□ -0.12
PCP4P48539 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.29□□□□□ -0.12
PCP4P48539 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.29□□□□□ -0.12
PCP4P48539 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.29□□□□□ -0.12
PCP4P48539 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PCP4P48539 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.29□□□□□ -0.12
PCP4P48539 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PCP4P48539 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
PCP4P48539 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.29□□□□□ -0.12
PCP4P48539 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCP4P48539 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.28□□□□□ -0.12
PCP4P48539 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCP4P48539 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.28□□□□□ -0.12
PCP4P48539 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCP4P48539 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PCP4P48539 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCP4P48539 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PCP4P48539 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCP4P48539 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC14.28□□□□□ -0.12
PCP4P48539 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCP4P48539 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCP4P48539 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCP4P48539 PCDHA12-202ENST00000613593 2588 ntBASIC14.28□□□□□ -0.12
PCP4P48539 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCP4P48539 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PCP4P48539 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCP4P48539 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCP4P48539 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCP4P48539 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCP4P48539 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCP4P48539 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PCP4P48539 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCP4P48539 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCP4P48539 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCP4P48539 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCP4P48539 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCP4P48539 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms