Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 PBX2P1-201ENST00000493219 1291 ntBASIC18.35■□□□□ 0.53
COPS3Q9UNS2 AP001330.3-201ENST00000520123 633 ntBASIC18.35■□□□□ 0.53
COPS3Q9UNS2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.34■□□□□ 0.53
COPS3Q9UNS2 AFG3L1P-217ENST00000557444 2447 ntBASIC18.34■□□□□ 0.53
COPS3Q9UNS2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 AC061975.6-201ENST00000579045 1553 ntBASIC18.34■□□□□ 0.53
COPS3Q9UNS2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 MIR572-201ENST00000384983 95 ntBASIC18.34■□□□□ 0.53
COPS3Q9UNS2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 EEF1DP3-203ENST00000566025 782 ntBASIC18.34■□□□□ 0.53
COPS3Q9UNS2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS3Q9UNS2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.33■□□□□ 0.53
COPS3Q9UNS2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COPS3Q9UNS2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.33■□□□□ 0.53
COPS3Q9UNS2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.33■□□□□ 0.53
COPS3Q9UNS2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COPS3Q9UNS2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COPS3Q9UNS2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.33■□□□□ 0.53
COPS3Q9UNS2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPS3Q9UNS2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPS3Q9UNS2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.33■□□□□ 0.52
COPS3Q9UNS2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.33■□□□□ 0.52
COPS3Q9UNS2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COPS3Q9UNS2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COPS3Q9UNS2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPS3Q9UNS2 AL512408.1-201ENST00000569378 2000 ntBASIC18.33■□□□□ 0.52
COPS3Q9UNS2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPS3Q9UNS2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPS3Q9UNS2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COPS3Q9UNS2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPS3Q9UNS2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPS3Q9UNS2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.32■□□□□ 0.52
COPS3Q9UNS2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPS3Q9UNS2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COPS3Q9UNS2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COPS3Q9UNS2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPS3Q9UNS2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.32■□□□□ 0.52
COPS3Q9UNS2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.32■□□□□ 0.52
COPS3Q9UNS2 AC106739.1-201ENST00000617035 715 ntBASIC18.32■□□□□ 0.52
COPS3Q9UNS2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COPS3Q9UNS2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.32■□□□□ 0.52
COPS3Q9UNS2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COPS3Q9UNS2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.32■□□□□ 0.52
COPS3Q9UNS2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPS3Q9UNS2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPS3Q9UNS2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.32■□□□□ 0.52
COPS3Q9UNS2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.31■□□□□ 0.52
COPS3Q9UNS2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.31■□□□□ 0.52
COPS3Q9UNS2 AC112907.3-201ENST00000577781 2400 ntBASIC18.31■□□□□ 0.52
COPS3Q9UNS2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPS3Q9UNS2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPS3Q9UNS2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COPS3Q9UNS2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.31■□□□□ 0.52
COPS3Q9UNS2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.31■□□□□ 0.52
COPS3Q9UNS2 AC053503.5-201ENST00000601508 636 ntBASIC18.31■□□□□ 0.52
COPS3Q9UNS2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.31■□□□□ 0.52
COPS3Q9UNS2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COPS3Q9UNS2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COPS3Q9UNS2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
COPS3Q9UNS2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.31■□□□□ 0.52
COPS3Q9UNS2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.31■□□□□ 0.52
COPS3Q9UNS2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COPS3Q9UNS2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COPS3Q9UNS2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
COPS3Q9UNS2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms