Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 NEFHP1-201ENST00000412845 2629 ntBASIC22.52■■□□□ 1.2
KCNF1Q9H3M0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KCNF1Q9H3M0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
KCNF1Q9H3M0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
KCNF1Q9H3M0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
KCNF1Q9H3M0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.52■■□□□ 1.2
KCNF1Q9H3M0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KCNF1Q9H3M0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
KCNF1Q9H3M0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KCNF1Q9H3M0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
KCNF1Q9H3M0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KCNF1Q9H3M0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KCNF1Q9H3M0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.52■■□□□ 1.2
KCNF1Q9H3M0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.52■■□□□ 1.2
KCNF1Q9H3M0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.52■■□□□ 1.2
KCNF1Q9H3M0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 AC099791.2-201ENST00000605725 427 ntBASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 AC010997.5-201ENST00000609182 354 ntBASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
KCNF1Q9H3M0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.5■■□□□ 1.19
KCNF1Q9H3M0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 AC026471.1-201ENST00000564629 3026 ntBASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 AC092720.2-201ENST00000602388 1665 ntBASIC22.49■■□□□ 1.19
KCNF1Q9H3M0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 AC011484.1-201ENST00000377652 1995 ntBASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KCNF1Q9H3M0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.47■■□□□ 1.19
KCNF1Q9H3M0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
KCNF1Q9H3M0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
KCNF1Q9H3M0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.47■■□□□ 1.19
KCNF1Q9H3M0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
KCNF1Q9H3M0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KCNF1Q9H3M0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KCNF1Q9H3M0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
KCNF1Q9H3M0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms