Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.314e-8■■■■□ 24.8
XRN2Q9H0D6 SCAF4-203ENST00000434667 3846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.844e-8■■■■□ 24.8
XRN2Q9H0D6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.758e-7■■■■□ 24.8
XRN2Q9H0D6 VEGFA-214ENST00000493786 551 ntTSL 28.62□□□□□ -1.035e-7■■■■□ 24.8
XRN2Q9H0D6 SF1-214ENST00000477596 802 ntTSL 226.21■■□□□ 1.795e-7■■■■□ 24.8
XRN2Q9H0D6 SF1-210ENST00000443908 767 ntTSL 315.33■□□□□ 0.045e-7■■■■□ 24.8
XRN2Q9H0D6 SF1-216ENST00000486867 875 ntTSL 315.32■□□□□ 0.045e-7■■■■□ 24.8
XRN2Q9H0D6 SF1-206ENST00000413725 843 ntTSL 214.99□□□□□ -0.015e-7■■■■□ 24.8
XRN2Q9H0D6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.52e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-208ENST00000470171 746 ntTSL 218.19■□□□□ 0.52e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-205ENST00000465559 677 ntTSL 317.97■□□□□ 0.472e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.462e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.442e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-213ENST00000489003 976 ntTSL 217.46■□□□□ 0.392e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.392e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-210ENST00000474345 713 ntTSL 317.46■□□□□ 0.392e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-216ENST00000491013 912 ntTSL 517.29■□□□□ 0.362e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-212ENST00000487002 2017 ntTSL 217.16■□□□□ 0.342e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-219ENST00000495308 808 ntTSL 215.74■□□□□ 0.112e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-204ENST00000461507 1022 ntTSL 215.24■□□□□ 0.032e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-207ENST00000468479 938 ntTSL 215.18■□□□□ 0.022e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.032e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-211ENST00000477057 741 ntTSL 214.73□□□□□ -0.052e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC14.67□□□□□ -0.062e-6■■■■□ 24.8
XRN2Q9H0D6 FDPS-209ENST00000471117 630 ntTSL 39.65□□□□□ -0.862e-6■■■■□ 24.8
XRN2Q9H0D6 PPP2R2D-207ENST00000616467 2058 ntTSL 1 (best)27.75■■■□□ 2.035e-13■■■■□ 24.8
XRN2Q9H0D6 MNT-202ENST00000571232 508 ntTSL 423.79■■□□□ 1.41e-6■■■■□ 24.8
XRN2Q9H0D6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.265e-13■■■■□ 24.8
XRN2Q9H0D6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 13e-6■■■■□ 24.8
XRN2Q9H0D6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.823e-6■■■■□ 24.8
XRN2Q9H0D6 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.87■□□□□ 0.611e-6■■■■□ 24.8
XRN2Q9H0D6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.011e-6■■■■□ 24.8
XRN2Q9H0D6 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.071e-6■■■■□ 24.8
XRN2Q9H0D6 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.351e-6■■■■□ 24.8
XRN2Q9H0D6 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.691e-6■■■■□ 24.8
XRN2Q9H0D6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.5■■□□□ 1.351e-6■■■■□ 24.8
XRN2Q9H0D6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.051e-6■■■■□ 24.8
XRN2Q9H0D6 ANKRD52-203ENST00000548241 651 ntTSL 315.15■□□□□ 0.023e-8■■■■□ 24.8
XRN2Q9H0D6 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.343e-8■■■■□ 24.8
XRN2Q9H0D6 SNRK-202ENST00000429705 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.421e-6■■■■□ 24.8
XRN2Q9H0D6 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.441e-6■■■■□ 24.8
XRN2Q9H0D6 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.621e-6■■■■□ 24.8
XRN2Q9H0D6 PTPN4-203ENST00000430976 4154 ntTSL 55.63□□□□□ -1.511e-6■■■■□ 24.8
XRN2Q9H0D6 PTPN4-205ENST00000433888 954 ntTSL 33.99□□□□□ -1.771e-6■■■■□ 24.8
XRN2Q9H0D6 AC141557.1-201ENST00000540982 400 ntBASIC0.54□□□□□ -2.326e-7■■■■□ 24.8
XRN2Q9H0D6 CYTH1-216ENST00000591574 1043 ntTSL 329.33■■■□□ 2.291e-6■■■■□ 24.8
XRN2Q9H0D6 GATD1-210ENST00000529362 578 ntTSL 327.39■■□□□ 1.988e-7■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-223ENST00000471679 435 ntTSL 427.09■■□□□ 1.931e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-227ENST00000485432 566 ntTSL 424.24■■□□□ 1.471e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-221ENST00000452492 581 ntTSL 322.13■■□□□ 1.131e-6■■■■□ 24.8
XRN2Q9H0D6 HDAC7-227ENST00000548080 1479 ntTSL 519.94■□□□□ 0.781e-6■■■■□ 24.8
XRN2Q9H0D6 GATD1-213ENST00000532320 1273 ntTSL 1 (best)19.77■□□□□ 0.761e-6■■■■□ 24.8
XRN2Q9H0D6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.23■□□□□ 0.671e-6■■■■□ 24.8
XRN2Q9H0D6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.2■□□□□ 0.661e-6■■■■□ 24.8
XRN2Q9H0D6 GATD1-216ENST00000534603 863 ntTSL 1 (best)19.01■□□□□ 0.631e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-203ENST00000414318 2088 ntTSL 518.46■□□□□ 0.551e-6■■■■□ 24.8
XRN2Q9H0D6 HDAC7-224ENST00000488927 739 ntTSL 518.28■□□□□ 0.521e-6■■■■□ 24.8
XRN2Q9H0D6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.78■□□□□ 0.441e-6■■■■□ 24.8
XRN2Q9H0D6 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.31■□□□□ 0.361e-6■■■■□ 24.8
XRN2Q9H0D6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.27■□□□□ 0.361e-6■■■■□ 24.8
XRN2Q9H0D6 GATD1-209ENST00000528602 569 ntTSL 216.78■□□□□ 0.281e-6■■■■□ 24.8
XRN2Q9H0D6 GATD1-214ENST00000532839 559 ntTSL 1 (best)16.78■□□□□ 0.281e-6■■■■□ 24.8
XRN2Q9H0D6 GATD1-211ENST00000529966 800 ntTSL 1 (best)16.52■□□□□ 0.241e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-206ENST00000423331 588 ntTSL 416.26■□□□□ 0.191e-6■■■■□ 24.8
XRN2Q9H0D6 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.181e-6■■■■□ 24.8
XRN2Q9H0D6 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.181e-6■■■■□ 24.8
XRN2Q9H0D6 HDAC7-217ENST00000459625 6414 ntTSL 215.94■□□□□ 0.141e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-216ENST00000444471 680 ntTSL 315.74■□□□□ 0.111e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-226ENST00000481396 609 ntTSL 415.74■□□□□ 0.111e-6■■■■□ 24.8
XRN2Q9H0D6 ADCY7-210ENST00000567277 2304 ntTSL 1 (best)15.48■□□□□ 0.071e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-218ENST00000445294 623 ntTSL 215.44■□□□□ 0.061e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-207ENST00000425944 591 ntTSL 415.3■□□□□ 0.041e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-204ENST00000414349 687 ntTSL 314.83□□□□□ -0.041e-6■■■■□ 24.8
XRN2Q9H0D6 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14□□□□□ -0.171e-6■■■■□ 24.8
XRN2Q9H0D6 HDAC7-221ENST00000477203 3122 ntTSL 213.68□□□□□ -0.221e-6■■■■□ 24.8
XRN2Q9H0D6 HDAC7-219ENST00000470668 4266 ntTSL 213.61□□□□□ -0.231e-6■■■■□ 24.8
XRN2Q9H0D6 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.291e-6■■■■□ 24.8
XRN2Q9H0D6 HDAC7-228ENST00000548938 2719 ntTSL 513.18□□□□□ -0.31e-6■■■■□ 24.8
XRN2Q9H0D6 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.351e-6■■■■□ 24.8
XRN2Q9H0D6 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.371e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-215ENST00000443499 681 ntTSL 512.67□□□□□ -0.381e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-202ENST00000412981 592 ntTSL 312.67□□□□□ -0.381e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-208ENST00000428355 757 ntTSL 312.17□□□□□ -0.461e-6■■■■□ 24.8
XRN2Q9H0D6 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.471e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-211ENST00000430169 492 ntTSL 311.96□□□□□ -0.491e-6■■■■□ 24.8
XRN2Q9H0D6 GATD1-201ENST00000319863 4357 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.531e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-229ENST00000497531 672 ntTSL 311.63□□□□□ -0.551e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-220ENST00000446863 557 ntTSL 410.91□□□□□ -0.661e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-205ENST00000415814 852 ntTSL 310.86□□□□□ -0.671e-6■■■■□ 24.8
XRN2Q9H0D6 GATD1-202ENST00000354286 3973 ntTSL 510.47□□□□□ -0.731e-6■■■■□ 24.8
XRN2Q9H0D6 CYTH1-217ENST00000592497 454 ntTSL 39.93□□□□□ -0.821e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.021e-6■■■■□ 24.8
XRN2Q9H0D6 TBC1D5-217ENST00000444756 545 ntTSL 47.44□□□□□ -1.221e-6■■■■□ 24.8
XRN2Q9H0D6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.55■□□□□ 0.724e-7■■■■□ 24.8
XRN2Q9H0D6 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.024e-7■■■■□ 24.8
XRN2Q9H0D6 C2-217ENST00000497706 1609 ntTSL 517.71■□□□□ 0.433e-6■■■■□ 24.8
XRN2Q9H0D6 C2-211ENST00000469372 1906 ntTSL 2 BASIC14.04□□□□□ -0.163e-6■■■■□ 24.8
XRN2Q9H0D6 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.76□□□□□ -0.213e-6■■■■□ 24.8
XRN2Q9H0D6 TNRC18-206ENST00000434361 577 ntTSL 318.86■□□□□ 0.612e-6■■■■□ 24.7
XRN2Q9H0D6 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC10.01□□□□□ -0.813e-7■■■■□ 24.7
Retrieved 100 of 21,068 protein–RNA pairs in 132.3 ms