RNA–Protein interactions for RNA: ENST00000534603.5

GATD1-216, Transcript of glutamine amidotransferase like class 1 domain containing 1, humanhuman

TSL 1 (best)

Gene GATD1, Length 863 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATD1-216ENST00000534603 NISCHQ9Y2I1 1504 aa39.72■■■■□ 3.95
GATD1-216ENST00000534603 CCDC180Q9P1Z9 1646 aa35.29■■■■□ 3.24
GATD1-216ENST00000534603 ABCC9O60706 1549 aa34.22■■■■□ 3.07
GATD1-216ENST00000534603 ZCCHC6Q5VYS8 1495 aaKnown RBP33.16■■■□□ 2.9
GATD1-216ENST00000534603 DCAF8L2P0C7V8 631 aa33.07■■■□□ 2.88
GATD1-216ENST00000534603 NACADO15069 1562 aa33.05■■■□□ 2.88
GATD1-216ENST00000534603 RB1CC1Q8TDY2 1594 aa33.05■■■□□ 2.88
GATD1-216ENST00000534603 MYO15BQ96JP2 1530 aa32.89■■■□□ 2.86
GATD1-216ENST00000534603 DCAF1Q9Y4B6 1507 aa32.86■■■□□ 2.85
GATD1-216ENST00000534603 UNC13AQ9UPW8 1703 aa32.43■■■□□ 2.78
GATD1-216ENST00000534603 SCRIBQ14160 1630 aa32.23■■■□□ 2.75
GATD1-216ENST00000534603 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
GATD1-216ENST00000534603 PABPN1Q86U42 306 aaKnown RBP eCLIP31.97■■■□□ 2.71
GATD1-216ENST00000534603 SHROOM4Q9ULL8 1493 aa31.68■■■□□ 2.66
GATD1-216ENST00000534603 EIF4G1Q04637 1599 aaKnown RBP31.17■■■□□ 2.58
GATD1-216ENST00000534603 DNAJC5BQ9UF47 199 aa31.07■■■□□ 2.56
GATD1-216ENST00000534603 CC2D2AQ9P2K1 1620 aa31■■■□□ 2.55
GATD1-216ENST00000534603 CECR2Q9BXF3 1484 aa30.91■■■□□ 2.54
GATD1-216ENST00000534603 SMARCA4P51532 1647 aa30.83■■■□□ 2.53
GATD1-216ENST00000534603 BAZ1AQ9NRL2 1556 aaPredicted RBP30.79■■■□□ 2.52
GATD1-216ENST00000534603 MROH2BQ7Z745 1585 aa30.63■■■□□ 2.49
GATD1-216ENST00000534603 SMARCA2P51531 1590 aa30.54■■■□□ 2.48
GATD1-216ENST00000534603 ATAD2BQ9ULI0 1458 aa30.52■■■□□ 2.48
GATD1-216ENST00000534603 PEG3Q9GZU2 1588 aa30.47■■■□□ 2.47
GATD1-216ENST00000534603 NCAPD3P42695 1498 aa30.44■■■□□ 2.46
GATD1-216ENST00000534603 HMGXB3Q12766 1538 aa30.38■■■□□ 2.45
GATD1-216ENST00000534603 WIZO95785 1651 aa30.38■■■□□ 2.45
GATD1-216ENST00000534603 RSF1Q96T23 1441 aaPredicted RBP30.33■■■□□ 2.45
GATD1-216ENST00000534603 BAZ1BQ9UIG0 1483 aaKnown RBP30.32■■■□□ 2.44
GATD1-216ENST00000534603 TOP2AP11388 1531 aaKnown RBP30.03■■■□□ 2.4
GATD1-216ENST00000534603 SUPT5HO00267 1087 aaKnown RBP29.78■■■□□ 2.36
GATD1-216ENST00000534603 NESP48681 1621 aa29.69■■■□□ 2.34
GATD1-216ENST00000534603 LAMC3Q9Y6N6 1575 aa29.67■■■□□ 2.34
GATD1-216ENST00000534603 CCDC88BA6NC98 1476 aa29.63■■■□□ 2.33
GATD1-216ENST00000534603 CADPSQ9ULU8 1353 aa29.56■■■□□ 2.32
GATD1-216ENST00000534603 ERCC6Q03468 1493 aa29.49■■■□□ 2.31
GATD1-216ENST00000534603 PRDM2Q13029 1718 aa29.46■■■□□ 2.31
GATD1-216ENST00000534603 CFTRP13569 1480 aa29.46■■■□□ 2.31
GATD1-216ENST00000534603 KIF21AQ7Z4S6 1674 aa29.45■■■□□ 2.31
GATD1-216ENST00000534603 PDS5BQ9NTI5 1447 aa29.41■■■□□ 2.3
GATD1-216ENST00000534603 FANCD2Q9BXW9 1451 aa29.28■■■□□ 2.28
GATD1-216ENST00000534603 CEP164Q9UPV0 1460 aa29.23■■■□□ 2.27
GATD1-216ENST00000534603 THOC2Q8NI27 1593 aaKnown RBP29.23■■■□□ 2.27
GATD1-216ENST00000534603 MRC2Q9UBG0 1479 aa29.13■■■□□ 2.25
GATD1-216ENST00000534603 CUX2O14529 1486 aa29.05■■■□□ 2.24
GATD1-216ENST00000534603 WDR62O43379 1518 aa29.04■■■□□ 2.24
GATD1-216ENST00000534603 URB2Q14146 1524 aaKnown RBP28.97■■■□□ 2.23
GATD1-216ENST00000534603 DNMBPQ6XZF7 1577 aa28.86■■■□□ 2.21
GATD1-216ENST00000534603 TOPBP1Q92547 1522 aa28.84■■■□□ 2.21
GATD1-216ENST00000534603 ABCC8Q09428 1581 aa28.84■■■□□ 2.21
GATD1-216ENST00000534603 CUX1P39880 1505 aa28.74■■■□□ 2.19
GATD1-216ENST00000534603 WRNQ14191 1432 aaPredicted RBP eCLIP28.62■■■□□ 2.17
GATD1-216ENST00000534603 POLA1P09884 1462 aaPredicted RBP28.6■■■□□ 2.17
GATD1-216ENST00000534603 BIVM-ERCC5R4GMW8 1640 aa28.6■■■□□ 2.17
GATD1-216ENST00000534603 FGD5Q6ZNL6 1462 aa28.59■■■□□ 2.17
GATD1-216ENST00000534603 SYNJ1O43426 1573 aa28.59■■■□□ 2.17
GATD1-216ENST00000534603 IFT140Q96RY7 1462 aa28.59■■■□□ 2.17
GATD1-216ENST00000534603 TOP2BQ02880 1626 aa28.58■■■□□ 2.17
GATD1-216ENST00000534603 TARBP1Q13395 1621 aaKnown RBP28.53■■■□□ 2.16
GATD1-216ENST00000534603 RAD54L2Q9Y4B4 1467 aa28.48■■■□□ 2.15
GATD1-216ENST00000534603 SOGA1O94964 1423 aa28.47■■■□□ 2.15
GATD1-216ENST00000534603 ZNF608Q9ULD9 1512 aaPredicted RBP28.43■■■□□ 2.14
GATD1-216ENST00000534603 WDR97A6NE52 1622 aa28.43■■■□□ 2.14
GATD1-216ENST00000534603 EIF4G3O43432 1585 aaKnown RBP28.41■■■□□ 2.14
GATD1-216ENST00000534603 ABCA10Q8WWZ4 1543 aa28.31■■■□□ 2.12
GATD1-216ENST00000534603 AQRO60306 1485 aaKnown RBP eCLIP28.29■■■□□ 2.121e-7■■■■■ 27.8
GATD1-216ENST00000534603 TDRD9Q8NDG6 1382 aaKnown RBP28.27■■■□□ 2.12
GATD1-216ENST00000534603 ABCA5Q8WWZ7 1642 aa28.23■■■□□ 2.11
GATD1-216ENST00000534603 PBRM1Q86U86 1689 aa28.23■■■□□ 2.11
GATD1-216ENST00000534603 GAPVD1Q14C86 1478 aa28.17■■■□□ 2.1
GATD1-216ENST00000534603 GRIN2BQ13224 1484 aa28.13■■■□□ 2.09
GATD1-216ENST00000534603 TRIM41Q8WV44 630 aa28.1■■■□□ 2.09
GATD1-216ENST00000534603 SNAPC4Q5SXM2 1469 aa28.08■■■□□ 2.09
GATD1-216ENST00000534603 CHD1O14646 1710 aa28.06■■■□□ 2.08
GATD1-216ENST00000534603 MAGI1Q96QZ7 1491 aaPredicted RBP28.03■■■□□ 2.08
GATD1-216ENST00000534603 KIF27Q86VH2 1401 aa28■■■□□ 2.07
GATD1-216ENST00000534603 ERICH3Q5RHP9 1530 aa27.99■■■□□ 2.07
GATD1-216ENST00000534603 ADAMTS12P58397 1594 aa27.95■■■□□ 2.07
GATD1-216ENST00000534603 SYNJ2O15056 1496 aa27.92■■■□□ 2.06
GATD1-216ENST00000534603 FBLN2P98095 1184 aa27.91■■■□□ 2.06
GATD1-216ENST00000534603 CHIC1Q5VXU3 224 aa27.9■■■□□ 2.06
GATD1-216ENST00000534603 CUL7Q14999 1698 aa27.85■■■□□ 2.05
GATD1-216ENST00000534603 CHMP7Q8WUX9 453 aaPredicted RBP27.85■■■□□ 2.05
GATD1-216ENST00000534603 OSCARQ8IYS5 282 aa27.84■■■□□ 2.05
GATD1-216ENST00000534603 FHAD1B1AJZ9 1412 aa27.84■■■□□ 2.05
GATD1-216ENST00000534603 RUSC2Q8N2Y8 1516 aa27.83■■■□□ 2.05
GATD1-216ENST00000534603 IGF1RP08069 1367 aa27.8■■■□□ 2.04
GATD1-216ENST00000534603 GRIN2AQ12879 1464 aa27.78■■■□□ 2.04
GATD1-216ENST00000534603 DNAJC5Q9H3Z4 198 aa27.78■■■□□ 2.04
GATD1-216ENST00000534603 CARMIL1Q5VZK9 1371 aa27.67■■■□□ 2.02
GATD1-216ENST00000534603 CEP170Q5SW79 1584 aa27.66■■■□□ 2.02
GATD1-216ENST00000534603 CLASP1Q7Z460 1538 aa27.66■■■□□ 2.02
GATD1-216ENST00000534603 EEA1Q15075 1411 aa27.63■■■□□ 2.01
GATD1-216ENST00000534603 NUP160Q12769 1436 aa27.62■■■□□ 2.01
GATD1-216ENST00000534603 RAPGEF2Q9Y4G8 1499 aa27.57■■■□□ 2
GATD1-216ENST00000534603 FAM9AQ8IZU1 332 aaPredicted RBP27.54■■■□□ 2
GATD1-216ENST00000534603 CSRNP3Q8WYN3 585 aa27.52■■■□□ 2
GATD1-216ENST00000534603 PRXQ9BXM0 1461 aa27.51■■□□□ 1.99
GATD1-216ENST00000534603 RIMBP3CA6NJZ7 1639 aa27.49■■□□□ 1.99
GATD1-216ENST00000534603 RIMBP3BA6NNM3 1639 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms