RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 DCAF8L2P0C7V8 631 aa28.37■■■□□ 2.13
HDAC7-217ENST00000459625 EHMT2Q96KQ7 1210 aa26.53■■□□□ 1.84
HDAC7-217ENST00000459625 SUPT5HO00267 1087 aaKnown RBP26.22■■□□□ 1.79
HDAC7-217ENST00000459625 SHROOM4Q9ULL8 1493 aa25.61■■□□□ 1.69
HDAC7-217ENST00000459625 TTBK1Q5TCY1 1321 aaPredicted RBP25.53■■□□□ 1.68
HDAC7-217ENST00000459625 PELP1Q8IZL8 1130 aaKnown RBP25.47■■□□□ 1.67
HDAC7-217ENST00000459625 APLP2Q06481 763 aa25.39■■□□□ 1.66
HDAC7-217ENST00000459625 RANGAP1P46060 587 aaPredicted RBP25.26■■□□□ 1.63
HDAC7-217ENST00000459625 FAM9AQ8IZU1 332 aaPredicted RBP25.2■■□□□ 1.62
HDAC7-217ENST00000459625 ATP1B4Q9UN42 357 aaPredicted RBP25.07■■□□□ 1.6
HDAC7-217ENST00000459625 ERICH6Q7L0X2 663 aa24.92■■□□□ 1.58
HDAC7-217ENST00000459625 PCGF6Q9BYE7 350 aa24.69■■□□□ 1.54
HDAC7-217ENST00000459625 MYT1LQ9UL68 1186 aa24.45■■□□□ 1.5
HDAC7-217ENST00000459625 CCER1Q8TC90 406 aaPredicted RBP24.41■■□□□ 1.5
HDAC7-217ENST00000459625 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
HDAC7-217ENST00000459625 YTHDC1Q96MU7 727 aaKnown RBP24.25■■□□□ 1.47
HDAC7-217ENST00000459625 MYT1Q01538 1121 aa24.2■■□□□ 1.46
HDAC7-217ENST00000459625 POLR3GLQ9BT43 218 aa24.18■■□□□ 1.46
HDAC7-217ENST00000459625 UBTFP17480 764 aaKnown RBP24.14■■□□□ 1.45
HDAC7-217ENST00000459625 CNGB1Q14028 1251 aaPredicted RBP24.13■■□□□ 1.45
HDAC7-217ENST00000459625 CENPBP07199 599 aaPredicted RBP24.08■■□□□ 1.45
HDAC7-217ENST00000459625 NEFLP07196 543 aa24.07■■□□□ 1.44
HDAC7-217ENST00000459625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.03■■□□□ 1.44
HDAC7-217ENST00000459625 HNRNPUL2Q1KMD3 747 aaKnown RBP24.03■■□□□ 1.44
HDAC7-217ENST00000459625 PPARGC1BQ86YN6 1023 aaKnown RBP24.02■■□□□ 1.44
HDAC7-217ENST00000459625 SLC4A1APQ9BWU0 796 aaKnown RBP23.96■■□□□ 1.43
HDAC7-217ENST00000459625 TRIM41Q8WV44 630 aa23.95■■□□□ 1.42
HDAC7-217ENST00000459625 ITGAEP38570 1179 aa23.85■■□□□ 1.41
HDAC7-217ENST00000459625 DAXXQ9UER7 740 aaPredicted RBP23.82■■□□□ 1.4
HDAC7-217ENST00000459625 NISCHQ9Y2I1 1504 aa23.73■■□□□ 1.39
HDAC7-217ENST00000459625 ZEB1P37275 1124 aaPredicted RBP23.51■■□□□ 1.35
HDAC7-217ENST00000459625 BCL11AQ9H165 835 aa23.38■■□□□ 1.33
HDAC7-217ENST00000459625 CLSPNQ9HAW4 1339 aa23.37■■□□□ 1.33
HDAC7-217ENST00000459625 SLC24A1O60721 1099 aa23.37■■□□□ 1.33
HDAC7-217ENST00000459625 ZNF316A6NFI3 1004 aaPredicted RBP23.22■■□□□ 1.31
HDAC7-217ENST00000459625 BCANQ96GW7 911 aa23.1■■□□□ 1.29
HDAC7-217ENST00000459625 PLPPR3Q6T4P5 718 aa23.03■■□□□ 1.28
HDAC7-217ENST00000459625 TRIM52Q96A61 297 aa22.96■■□□□ 1.27
HDAC7-217ENST00000459625 ZNF326Q5BKZ1 582 aaKnown RBP22.94■■□□□ 1.26
HDAC7-217ENST00000459625 FAM50AQ14320 339 aaKnown RBP22.93■■□□□ 1.26
HDAC7-217ENST00000459625 ZBTB47Q9UFB7 747 aaPredicted RBP22.89■■□□□ 1.25
HDAC7-217ENST00000459625 FBLN2P98095 1184 aa22.88■■□□□ 1.25
HDAC7-217ENST00000459625 RTL5Q5HYW3 569 aaPredicted RBP22.88■■□□□ 1.25
HDAC7-217ENST00000459625 NEUROD1Q13562 356 aa22.81■■□□□ 1.24
HDAC7-217ENST00000459625 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
HDAC7-217ENST00000459625 TRIM26Q12899 539 aaPredicted RBP22.72■■□□□ 1.23
HDAC7-217ENST00000459625 ARID3CA6NKF2 412 aa22.68■■□□□ 1.22
HDAC7-217ENST00000459625 CANXP27824 592 aaKnown RBP22.67■■□□□ 1.22
HDAC7-217ENST00000459625 HRCP23327 699 aa22.64■■□□□ 1.21
HDAC7-217ENST00000459625 NEFMP07197 916 aa22.51■■□□□ 1.19
HDAC7-217ENST00000459625 A0A0G2JS52 829 aa22.5■■□□□ 1.19
HDAC7-217ENST00000459625 PABPN1Q86U42 306 aaKnown RBP eCLIP22.47■■□□□ 1.19
HDAC7-217ENST00000459625 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
HDAC7-217ENST00000459625 ESF1Q9H501 851 aaKnown RBP22.43■■□□□ 1.18
HDAC7-217ENST00000459625 PLEKHG5O94827 1062 aa22.41■■□□□ 1.18
HDAC7-217ENST00000459625 CHGAP10645 457 aaKnown RBP22.37■■□□□ 1.17
HDAC7-217ENST00000459625 ZNF777Q9ULD5 760 aaPredicted RBP22.36■■□□□ 1.17
HDAC7-217ENST00000459625 STAG3Q9UJ98 1225 aa22.35■■□□□ 1.17
HDAC7-217ENST00000459625 DIEXFQ68CQ4 756 aaKnown RBP22.33■■□□□ 1.17
HDAC7-217ENST00000459625 P3H3Q8IVL6 736 aa22.32■■□□□ 1.16
HDAC7-217ENST00000459625 NPM2Q86SE8 214 aaKnown RBP22.28■■□□□ 1.16
HDAC7-217ENST00000459625 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.16
HDAC7-217ENST00000459625 ANP32CO43423 234 aa22.27■■□□□ 1.15
HDAC7-217ENST00000459625 CDK11AQ9UQ88 783 aaPredicted RBP22.21■■□□□ 1.15
HDAC7-217ENST00000459625 ZBTB7CA1YPR0 619 aa22.19■■□□□ 1.14
HDAC7-217ENST00000459625 HSP90AA1P07900 732 aaKnown RBP22.1■■□□□ 1.13
HDAC7-217ENST00000459625 SALL2Q9Y467 1007 aaPredicted RBP22.07■■□□□ 1.12
HDAC7-217ENST00000459625 TULP1O00294 542 aaPredicted RBP22.04■■□□□ 1.12
HDAC7-217ENST00000459625 ARXQ96QS3 562 aa21.99■■□□□ 1.11
HDAC7-217ENST00000459625 C14orf37Q86TY3 774 aa21.95■■□□□ 1.1
HDAC7-217ENST00000459625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.92■■□□□ 1.1
HDAC7-217ENST00000459625 EIF5BO60841 1220 aaKnown RBP21.91■■□□□ 1.1
HDAC7-217ENST00000459625 GTF3C3Q9Y5Q9 886 aa21.91■■□□□ 1.1
HDAC7-217ENST00000459625 ABCC9O60706 1549 aa21.91■■□□□ 1.1
HDAC7-217ENST00000459625 ANP32BQ92688 251 aaKnown RBP21.91■■□□□ 1.1
HDAC7-217ENST00000459625 NPM1P06748 294 aaKnown RBP eCLIP21.9■■□□□ 1.1
HDAC7-217ENST00000459625 ANP32AP39687 249 aaKnown RBP21.89■■□□□ 1.1
HDAC7-217ENST00000459625 CDK11BP21127 795 aaKnown RBP21.88■■□□□ 1.09
HDAC7-217ENST00000459625 HAP1P54257 671 aaPredicted RBP21.78■■□□□ 1.08
HDAC7-217ENST00000459625 FAM9BQ8IZU0 186 aa21.75■■□□□ 1.07
HDAC7-217ENST00000459625 NCBP3Q53F19 620 aaKnown RBP21.74■■□□□ 1.07
HDAC7-217ENST00000459625 UPF2Q9HAU5 1272 aaKnown RBP21.71■■□□□ 1.07
HDAC7-217ENST00000459625 TAOK2Q9UL54 1235 aa21.71■■□□□ 1.07
HDAC7-217ENST00000459625 TPRNQ4KMQ1 711 aa21.69■■□□□ 1.06
HDAC7-217ENST00000459625 KDM2AQ9Y2K7 1162 aa21.67■■□□□ 1.06
HDAC7-217ENST00000459625 CHIC2Q9UKJ5 165 aa21.64■■□□□ 1.06
HDAC7-217ENST00000459625 NPHP1O15259 732 aa21.58■■□□□ 1.05
HDAC7-217ENST00000459625 FKBP8Q14318 412 aa21.58■■□□□ 1.04
HDAC7-217ENST00000459625 ARID4BQ4LE39 1312 aaPredicted RBP21.57■■□□□ 1.04
HDAC7-217ENST00000459625 NBR1Q14596 966 aa21.57■■□□□ 1.04
HDAC7-217ENST00000459625 PPP1R15AO75807 674 aaPredicted RBP21.56■■□□□ 1.04
HDAC7-217ENST00000459625 HNRNPUQ00839 825 aaKnown RBP eCLIP21.55■■□□□ 1.04
HDAC7-217ENST00000459625 WDR43Q15061 677 aaKnown RBP eCLIP21.54■■□□□ 1.043e-9■■■■□ 20.2
HDAC7-217ENST00000459625 LMOD2Q6P5Q4 547 aa21.53■■□□□ 1.04
HDAC7-217ENST00000459625 SENP3-EIF4A1A0A087X0R7 540 aa21.51■■□□□ 1.03
HDAC7-217ENST00000459625 MYH16Q9H6N6 1097 aa21.48■■□□□ 1.03
HDAC7-217ENST00000459625 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.47■■□□□ 1.03
HDAC7-217ENST00000459625 TMC1Q8TDI8 760 aa21.47■■□□□ 1.03
HDAC7-217ENST00000459625 TONSLQ96HA7 1378 aa21.46■■□□□ 1.03
HDAC7-217ENST00000459625 DDX10Q13206 875 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms