Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.28■□□□□ 0.52
APH1AQ96BI3 RARRES2P4-201ENST00000514074 484 ntBASIC18.28■□□□□ 0.52
APH1AQ96BI3 AC105036.2-201ENST00000569468 176 ntBASIC18.28■□□□□ 0.52
APH1AQ96BI3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
APH1AQ96BI3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
APH1AQ96BI3 AC016405.3-201ENST00000607710 860 ntBASIC18.28■□□□□ 0.52
APH1AQ96BI3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.28■□□□□ 0.52
APH1AQ96BI3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APH1AQ96BI3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.28■□□□□ 0.52
APH1AQ96BI3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APH1AQ96BI3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
APH1AQ96BI3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
APH1AQ96BI3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APH1AQ96BI3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
APH1AQ96BI3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
APH1AQ96BI3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.27■□□□□ 0.52
APH1AQ96BI3 ID1-201ENST00000376105 1233 ntBASIC18.27■□□□□ 0.52
APH1AQ96BI3 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.27■□□□□ 0.52
APH1AQ96BI3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.27■□□□□ 0.52
APH1AQ96BI3 AC083906.2-201ENST00000511578 360 ntBASIC18.27■□□□□ 0.52
APH1AQ96BI3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
APH1AQ96BI3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.27■□□□□ 0.52
APH1AQ96BI3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.27■□□□□ 0.52
APH1AQ96BI3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
APH1AQ96BI3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.27■□□□□ 0.52
APH1AQ96BI3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
APH1AQ96BI3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
APH1AQ96BI3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.27■□□□□ 0.51
APH1AQ96BI3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
APH1AQ96BI3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
APH1AQ96BI3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
APH1AQ96BI3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APH1AQ96BI3 AC026310.3-201ENST00000625186 2373 ntBASIC18.26■□□□□ 0.51
APH1AQ96BI3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
APH1AQ96BI3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
APH1AQ96BI3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APH1AQ96BI3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
APH1AQ96BI3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APH1AQ96BI3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
APH1AQ96BI3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
APH1AQ96BI3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
APH1AQ96BI3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APH1AQ96BI3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
APH1AQ96BI3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APH1AQ96BI3 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.26■□□□□ 0.51
APH1AQ96BI3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.26■□□□□ 0.51
APH1AQ96BI3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
APH1AQ96BI3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
APH1AQ96BI3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APH1AQ96BI3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APH1AQ96BI3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APH1AQ96BI3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APH1AQ96BI3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
APH1AQ96BI3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
APH1AQ96BI3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
APH1AQ96BI3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
APH1AQ96BI3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
APH1AQ96BI3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
APH1AQ96BI3 SLC29A4P1-201ENST00000398760 971 ntBASIC18.25■□□□□ 0.51
APH1AQ96BI3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.25■□□□□ 0.51
APH1AQ96BI3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APH1AQ96BI3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.25■□□□□ 0.51
APH1AQ96BI3 AL109923.1-201ENST00000618799 583 ntBASIC18.25■□□□□ 0.51
APH1AQ96BI3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.25■□□□□ 0.51
APH1AQ96BI3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.25■□□□□ 0.51
APH1AQ96BI3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APH1AQ96BI3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
APH1AQ96BI3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
APH1AQ96BI3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
APH1AQ96BI3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.25■□□□□ 0.51
APH1AQ96BI3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APH1AQ96BI3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
APH1AQ96BI3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
APH1AQ96BI3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
APH1AQ96BI3 AL512625.2-201ENST00000417533 625 ntBASIC18.24■□□□□ 0.51
APH1AQ96BI3 HLA-L-209ENST00000420110 1011 ntBASIC18.24■□□□□ 0.51
APH1AQ96BI3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.24■□□□□ 0.51
APH1AQ96BI3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.24■□□□□ 0.51
APH1AQ96BI3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APH1AQ96BI3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APH1AQ96BI3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APH1AQ96BI3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
APH1AQ96BI3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
APH1AQ96BI3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.24■□□□□ 0.51
APH1AQ96BI3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APH1AQ96BI3 MKRN4P-201ENST00000444706 1521 ntBASIC18.23■□□□□ 0.51
APH1AQ96BI3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
APH1AQ96BI3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
APH1AQ96BI3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APH1AQ96BI3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APH1AQ96BI3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
APH1AQ96BI3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APH1AQ96BI3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
APH1AQ96BI3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
APH1AQ96BI3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
APH1AQ96BI3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
APH1AQ96BI3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.23■□□□□ 0.51
APH1AQ96BI3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
APH1AQ96BI3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.23■□□□□ 0.51
APH1AQ96BI3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms