Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 AC026185.1-201ENST00000445748 174 ntBASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 AL591742.1-201ENST00000604433 565 ntBASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 AC007322.4-201ENST00000509611 723 ntBASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQA1Q5Y7H0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.66
HLA-DQA1Q5Y7H0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 AC091799.1-201ENST00000422823 811 ntBASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 AC008694.1-202ENST00000636953 945 ntBASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.2■□□□□ 0.66
HLA-DQA1Q5Y7H0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 CDCA4P2-201ENST00000441182 718 ntBASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DQA1Q5Y7H0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DQA1Q5Y7H0 CNN2P6-201ENST00000439038 900 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms