Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC23.61■■□□□ 1.37
COL13A1Q5TAT6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
COL13A1Q5TAT6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.61■■□□□ 1.37
COL13A1Q5TAT6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.61■■□□□ 1.37
COL13A1Q5TAT6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC23.61■■□□□ 1.37
COL13A1Q5TAT6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL13A1Q5TAT6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 AC092647.4-201ENST00000457211 535 ntBASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COL13A1Q5TAT6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 TSPY5P-201ENST00000426936 936 ntBASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 AC116562.2-201ENST00000507042 360 ntBASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC23.59■■□□□ 1.37
COL13A1Q5TAT6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL13A1Q5TAT6 AC004870.1-201ENST00000315132 882 ntBASIC23.58■■□□□ 1.37
COL13A1Q5TAT6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC23.58■■□□□ 1.37
COL13A1Q5TAT6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL13A1Q5TAT6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
COL13A1Q5TAT6 AC116407.4-201ENST00000623319 1061 ntBASIC23.58■■□□□ 1.37
COL13A1Q5TAT6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL13A1Q5TAT6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
COL13A1Q5TAT6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
COL13A1Q5TAT6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 AC005829.2-201ENST00000571422 1056 ntBASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.57■■□□□ 1.36
COL13A1Q5TAT6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 AC061975.6-201ENST00000579045 1553 ntBASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 AC005332.1-201ENST00000577698 1310 ntBASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.56■■□□□ 1.36
COL13A1Q5TAT6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL13A1Q5TAT6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL13A1Q5TAT6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.55■■□□□ 1.36
COL13A1Q5TAT6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL13A1Q5TAT6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.55■■□□□ 1.36
COL13A1Q5TAT6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
COL13A1Q5TAT6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.55■■□□□ 1.36
COL13A1Q5TAT6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC23.55■■□□□ 1.36
COL13A1Q5TAT6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms