Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB4Q9UN71 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 PBX2P1-201ENST00000493219 1291 ntBASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGB4Q9UN71 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 AL049796.1-201ENST00000565336 1766 ntBASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 AC096631.2-201ENST00000436136 790 ntBASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB4Q9UN71 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 AC099791.1-201ENST00000416440 715 ntBASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 AC027682.1-201ENST00000562846 899 ntBASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB4Q9UN71 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 AC105233.4-201ENST00000642045 216 ntBASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGB4Q9UN71 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms