Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SDHAF3Q9NRP4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 AL049796.1-201ENST00000565336 1766 ntBASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 AL591742.1-201ENST00000604433 565 ntBASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SDHAF3Q9NRP4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.96■□□□□ 0.62
SDHAF3Q9NRP4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 FEM1AP4-201ENST00000443167 1987 ntBASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.95■□□□□ 0.62
SDHAF3Q9NRP4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 AC026185.1-201ENST00000445748 174 ntBASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 AL162412.1-201ENST00000567129 965 ntBASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 AC073111.5-205ENST00000641717 521 ntBASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SDHAF3Q9NRP4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 AC091799.1-201ENST00000422823 811 ntBASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 AC116050.2-201ENST00000612102 1779 ntBASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SDHAF3Q9NRP4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAF3Q9NRP4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SDHAF3Q9NRP4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SDHAF3Q9NRP4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.92■□□□□ 0.62
SDHAF3Q9NRP4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAF3Q9NRP4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAF3Q9NRP4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHAF3Q9NRP4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms