Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.55□□□□□ -1.684e-8■■■■□ 26
U2AF2P26368 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.49■□□□□ 0.712e-27■■■■□ 26
U2AF2P26368 CLIP1-219ENST00000620786 5913 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.431e-6■■■■□ 26
U2AF2P26368 CLIP1-213ENST00000540338 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.451e-6■■■■□ 26
U2AF2P26368 CLIP1-203ENST00000361654 5568 ntTSL 5 BASIC11.91□□□□□ -0.51e-6■■■■□ 26
U2AF2P26368 CLIP1-209ENST00000537178 5229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.511e-6■■■■□ 26
U2AF2P26368 CLIP1-201ENST00000302528 5833 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.561e-6■■■■□ 26
U2AF2P26368 CLIP1-202ENST00000358808 5880 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.631e-6■■■■□ 26
U2AF2P26368 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC9.92□□□□□ -0.821e-6■■■■□ 26
U2AF2P26368 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.66■■□□□ 1.382e-6■■■■□ 26
U2AF2P26368 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.55■■□□□ 1.042e-6■■■■□ 26
U2AF2P26368 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.38■□□□□ 0.852e-6■■■■□ 26
U2AF2P26368 TNFAIP3-203ENST00000421450 421 ntTSL 219.6■□□□□ 0.736e-17■■■■□ 26
U2AF2P26368 RPAP1-210ENST00000567866 955 ntTSL 519.04■□□□□ 0.642e-6■■■■□ 26
U2AF2P26368 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.612e-6■■■■□ 26
U2AF2P26368 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.552e-6■■■■□ 26
U2AF2P26368 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.77■□□□□ 0.442e-6■■■■□ 26
U2AF2P26368 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.282e-6■■■■□ 26
U2AF2P26368 TNFAIP3-204ENST00000433680 465 ntTSL 316.72■□□□□ 0.276e-17■■■■□ 26
U2AF2P26368 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.6■□□□□ 0.252e-6■■■■□ 26
U2AF2P26368 NF2-211ENST00000432151 1000 ntTSL 1 (best)14.98□□□□□ -0.012e-6■■■■□ 26
U2AF2P26368 POLR1C-204ENST00000423780 418 ntTSL 514.48□□□□□ -0.093e-7■■■■□ 26
U2AF2P26368 NF2-207ENST00000397789 1857 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.12e-6■■■■□ 26
U2AF2P26368 NF2-204ENST00000361166 1837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.12e-6■■■■□ 26
U2AF2P26368 RPAP1-201ENST00000304330 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.322e-6■■■■□ 26
U2AF2P26368 NF2-206ENST00000361676 1716 ntTSL 1 (best) BASIC12.54□□□□□ -0.42e-6■■■■□ 26
U2AF2P26368 RPAP1-204ENST00000562303 5897 ntTSL 1 (best)12.39□□□□□ -0.432e-6■■■■□ 26
U2AF2P26368 RPAP1-205ENST00000563293 499 ntTSL 310.7□□□□□ -0.72e-6■■■■□ 26
U2AF2P26368 RPAP1-202ENST00000561603 3906 ntTSL 5 BASIC9.95□□□□□ -0.822e-6■■■■□ 26
U2AF2P26368 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.632e-6■■■■□ 26
U2AF2P26368 SEC62-210ENST00000497277 525 ntTSL 1 (best)2.61□□□□□ -1.992e-6■■■■□ 26
U2AF2P26368 POLR1C-205ENST00000428025 576 ntTSL 42.02□□□□□ -2.093e-7■■■■□ 26
U2AF2P26368 PTPN18-213ENST00000489215 460 ntTSL 426.88■■□□□ 1.894e-7■■■■□ 26
U2AF2P26368 PTPN18-205ENST00000428843 785 ntTSL 325.35■■□□□ 1.654e-7■■■■□ 26
U2AF2P26368 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.8■■□□□ 1.564e-7■■■■□ 26
U2AF2P26368 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.834e-7■■■■□ 26
U2AF2P26368 PTPN18-212ENST00000483617 595 ntTSL 313□□□□□ -0.334e-7■■■■□ 26
U2AF2P26368 TRPM7-209ENST00000561443 1193 ntTSL 28.52□□□□□ -1.052e-10■■■■□ 26
U2AF2P26368 TRPM7-202ENST00000558444 465 ntTSL 35.43□□□□□ -1.542e-10■■■■□ 26
U2AF2P26368 TRPM7-206ENST00000560849 624 ntTSL 34.04□□□□□ -1.762e-10■■■■□ 26
U2AF2P26368 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.84e-10■■■■□ 26
U2AF2P26368 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.71■□□□□ 0.911e-6■■■■□ 26
U2AF2P26368 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.421e-6■■■■□ 26
U2AF2P26368 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.73■□□□□ 0.271e-6■■■■□ 26
U2AF2P26368 ALAS2-207ENST00000493869 658 ntTSL 215.83■□□□□ 0.121e-6■■■■□ 26
U2AF2P26368 ALAS2-205ENST00000463868 646 ntTSL 315.83■□□□□ 0.121e-6■■■■□ 26
U2AF2P26368 ALAS2-206ENST00000477869 582 ntTSL 513.43□□□□□ -0.261e-6■■■■□ 26
U2AF2P26368 ALAS2-204ENST00000455688 664 ntTSL 27.25□□□□□ -1.251e-6■■■■□ 26
U2AF2P26368 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.54■■□□□ 1.362e-6■■■■□ 26
U2AF2P26368 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.52■□□□□ 0.42e-6■■■■□ 26
U2AF2P26368 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.372e-6■■■■□ 26
U2AF2P26368 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC11.84□□□□□ -0.512e-6■■■■□ 26
U2AF2P26368 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.822e-6■■■■□ 26
U2AF2P26368 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC9.35□□□□□ -0.912e-6■■■■□ 26
U2AF2P26368 RNF213-205ENST00000558116 3768 ntTSL 29.89□□□□□ -0.832e-7■■■■□ 26
U2AF2P26368 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.14■■□□□ 1.614e-16■■■■□ 26
U2AF2P26368 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.424e-16■■■■□ 26
U2AF2P26368 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC16■□□□□ 0.154e-16■■■■□ 26
U2AF2P26368 PWWP2A-203ENST00000520662 407 ntTSL 35.84□□□□□ -1.474e-16■■■■□ 26
U2AF2P26368 MNAT1-209ENST00000557134 680 ntTSL 33.99□□□□□ -1.771e-6■■■■□ 26
U2AF2P26368 MNAT1-204ENST00000554002 616 ntTSL 31.14□□□□□ -2.231e-6■■■■□ 26
U2AF2P26368 HNRNPLL-211ENST00000498516 655 ntTSL 323.54■■□□□ 1.365e-18■■■■□ 26
U2AF2P26368 FANCA-224ENST00000567510 461 ntTSL 37.59□□□□□ -1.194e-9■■■■□ 26
U2AF2P26368 CCNH-208ENST00000510921 549 ntTSL 41.68□□□□□ -2.144e-9■■■■□ 26
U2AF2P26368 CCNH-205ENST00000505587 1940 ntTSL 21.39□□□□□ -2.194e-9■■■■□ 26
U2AF2P26368 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.285e-7■■■■□ 25.9
U2AF2P26368 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.745e-7■■■■□ 25.9
U2AF2P26368 SLC3A2-207ENST00000535768 597 ntTSL 511.22□□□□□ -0.611e-43■■■■□ 25.9
U2AF2P26368 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.636e-8■■■■□ 25.9
U2AF2P26368 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.54■□□□□ 0.086e-8■■■■□ 25.9
U2AF2P26368 IMPA1-213ENST00000523942 793 ntTSL 38.95□□□□□ -0.986e-8■■■■□ 25.9
U2AF2P26368 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.55□□□□□ -1.26e-8■■■■□ 25.9
U2AF2P26368 IMPA1-212ENST00000523710 731 ntTSL 36.34□□□□□ -1.396e-8■■■■□ 25.9
U2AF2P26368 IMPA1-204ENST00000518188 773 ntTSL 44.7□□□□□ -1.666e-8■■■■□ 25.9
U2AF2P26368 ATAD2B-202ENST00000366438 867 ntTSL 312.61□□□□□ -0.393e-8■■■■□ 25.9
U2AF2P26368 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.513e-8■■■■□ 25.9
U2AF2P26368 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.925e-11■■■■□ 25.9
U2AF2P26368 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.65e-11■■■■□ 25.9
U2AF2P26368 ZSWIM7-204ENST00000460315 723 ntTSL 324.48■■□□□ 1.515e-11■■■■□ 25.9
U2AF2P26368 ZSWIM7-212ENST00000491631 879 ntTSL 224.28■■□□□ 1.485e-11■■■■□ 25.9
U2AF2P26368 ELF2-208ENST00000511006 1434 ntTSL 1 (best)24.25■■□□□ 1.475e-11■■■■□ 25.9
U2AF2P26368 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.425e-11■■■■□ 25.9
U2AF2P26368 ZSWIM7-210ENST00000486706 918 ntTSL 1 (best)23.8■■□□□ 1.45e-11■■■■□ 25.9
U2AF2P26368 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.49■■□□□ 1.356e-6■■■■□ 25.9
U2AF2P26368 ZSWIM7-203ENST00000460252 682 ntTSL 222.05■■□□□ 1.125e-11■■■■□ 25.9
U2AF2P26368 ZSWIM7-218ENST00000585208 987 ntTSL 1 (best)22.04■■□□□ 1.125e-11■■■■□ 25.9
U2AF2P26368 ZSWIM7-206ENST00000474716 671 ntTSL 321.86■■□□□ 1.095e-11■■■■□ 25.9
U2AF2P26368 ZSWIM7-211ENST00000490395 1264 ntTSL 1 (best)21.84■■□□□ 1.095e-11■■■■□ 25.9
U2AF2P26368 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.73■□□□□ 0.915e-11■■■■□ 25.9
U2AF2P26368 ZSWIM7-217ENST00000584519 677 ntTSL 319.71■□□□□ 0.755e-11■■■■□ 25.9
U2AF2P26368 DPH2-210ENST00000524776 1596 ntTSL 219.1■□□□□ 0.651e-6■■■■□ 25.9
U2AF2P26368 DPH2-209ENST00000495421 2414 ntTSL 218.31■□□□□ 0.521e-6■■■■□ 25.9
U2AF2P26368 ZSWIM7-215ENST00000497719 721 ntTSL 518.09■□□□□ 0.495e-11■■■■□ 25.9
U2AF2P26368 ZSWIM7-208ENST00000476496 969 ntTSL 317.49■□□□□ 0.395e-11■■■■□ 25.9
U2AF2P26368 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.24■□□□□ 0.355e-11■■■■□ 25.9
U2AF2P26368 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.69■□□□□ 0.265e-11■■■■□ 25.9
U2AF2P26368 ZSWIM7-214ENST00000497434 1104 ntTSL 516.59■□□□□ 0.255e-11■■■■□ 25.9
U2AF2P26368 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC15.59■□□□□ 0.091e-6■■■■□ 25.9
U2AF2P26368 STAT2-207ENST00000556539 3278 ntTSL 1 (best)15.47■□□□□ 0.072e-7■■■■□ 25.9
U2AF2P26368 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.021e-6■■■■□ 25.9
Retrieved 100 of 36,523 protein–RNA pairs in 274.4 ms