RNA–Protein interactions for RNA: ENST00000433680.1

TNFAIP3-204, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-204ENST00000433680 NISCHQ9Y2I1 1504 aa35.3■■■■□ 3.24
TNFAIP3-204ENST00000433680 CCDC180Q9P1Z9 1646 aa31.34■■■□□ 2.61
TNFAIP3-204ENST00000433680 ABCC9O60706 1549 aa30.3■■■□□ 2.44
TNFAIP3-204ENST00000433680 ZCCHC6Q5VYS8 1495 aaKnown RBP29.45■■■□□ 2.31
TNFAIP3-204ENST00000433680 NACADO15069 1562 aa29.39■■■□□ 2.29
TNFAIP3-204ENST00000433680 RB1CC1Q8TDY2 1594 aa29.35■■■□□ 2.29
TNFAIP3-204ENST00000433680 MYO15BQ96JP2 1530 aa29.32■■■□□ 2.28
TNFAIP3-204ENST00000433680 DCAF8L2P0C7V8 631 aa29.32■■■□□ 2.28
TNFAIP3-204ENST00000433680 DCAF1Q9Y4B6 1507 aa29.28■■■□□ 2.28
TNFAIP3-204ENST00000433680 UNC13AQ9UPW8 1703 aa28.67■■■□□ 2.18
TNFAIP3-204ENST00000433680 SCRIBQ14160 1630 aa28.52■■■□□ 2.16
TNFAIP3-204ENST00000433680 BICRAQ9NZM4 1560 aa28.41■■■□□ 2.14
TNFAIP3-204ENST00000433680 PABPN1Q86U42 306 aaKnown RBP eCLIP28.33■■■□□ 2.13
TNFAIP3-204ENST00000433680 SHROOM4Q9ULL8 1493 aa28.23■■■□□ 2.11
TNFAIP3-204ENST00000433680 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
TNFAIP3-204ENST00000433680 DNAJC5BQ9UF47 199 aa27.54■■■□□ 2
TNFAIP3-204ENST00000433680 CC2D2AQ9P2K1 1620 aa27.46■■□□□ 1.99
TNFAIP3-204ENST00000433680 CECR2Q9BXF3 1484 aa27.41■■□□□ 1.98
TNFAIP3-204ENST00000433680 BAZ1AQ9NRL2 1556 aaPredicted RBP27.37■■□□□ 1.97
TNFAIP3-204ENST00000433680 SMARCA4P51532 1647 aa27.34■■□□□ 1.97
TNFAIP3-204ENST00000433680 MROH2BQ7Z745 1585 aa27.17■■□□□ 1.94
TNFAIP3-204ENST00000433680 SMARCA2P51531 1590 aa27.14■■□□□ 1.93
TNFAIP3-204ENST00000433680 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
TNFAIP3-204ENST00000433680 PEG3Q9GZU2 1588 aa27.1■■□□□ 1.93
TNFAIP3-204ENST00000433680 NCAPD3P42695 1498 aa27.09■■□□□ 1.93
TNFAIP3-204ENST00000433680 HMGXB3Q12766 1538 aa27■■□□□ 1.91
TNFAIP3-204ENST00000433680 AEBP2Q6ZN18 517 aaPredicted RBP26.97■■□□□ 1.91
TNFAIP3-204ENST00000433680 RSF1Q96T23 1441 aaPredicted RBP26.96■■□□□ 1.91
TNFAIP3-204ENST00000433680 BAZ1BQ9UIG0 1483 aaKnown RBP26.92■■□□□ 1.9
TNFAIP3-204ENST00000433680 WIZO95785 1651 aa26.9■■□□□ 1.9
TNFAIP3-204ENST00000433680 TOP2AP11388 1531 aaKnown RBP26.66■■□□□ 1.86
TNFAIP3-204ENST00000433680 SUPT5HO00267 1087 aaKnown RBP26.42■■□□□ 1.82
TNFAIP3-204ENST00000433680 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
TNFAIP3-204ENST00000433680 CCDC88BA6NC98 1476 aa26.32■■□□□ 1.8
TNFAIP3-204ENST00000433680 CADPSQ9ULU8 1353 aa26.3■■□□□ 1.8
TNFAIP3-204ENST00000433680 NESP48681 1621 aa26.28■■□□□ 1.8
TNFAIP3-204ENST00000433680 CFTRP13569 1480 aa26.2■■□□□ 1.78
TNFAIP3-204ENST00000433680 PDS5BQ9NTI5 1447 aa26.16■■□□□ 1.78
TNFAIP3-204ENST00000433680 ERCC6Q03468 1493 aa26.14■■□□□ 1.78
TNFAIP3-204ENST00000433680 PRDM2Q13029 1718 aa26.08■■□□□ 1.77
TNFAIP3-204ENST00000433680 KIF21AQ7Z4S6 1674 aa26.04■■□□□ 1.76
TNFAIP3-204ENST00000433680 FANCD2Q9BXW9 1451 aa25.98■■□□□ 1.75
TNFAIP3-204ENST00000433680 CEP164Q9UPV0 1460 aa25.94■■□□□ 1.74
TNFAIP3-204ENST00000433680 THOC2Q8NI27 1593 aaKnown RBP25.89■■□□□ 1.73
TNFAIP3-204ENST00000433680 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
TNFAIP3-204ENST00000433680 CUX2O14529 1486 aa25.81■■□□□ 1.72
TNFAIP3-204ENST00000433680 WDR62O43379 1518 aa25.77■■□□□ 1.72
TNFAIP3-204ENST00000433680 URB2Q14146 1524 aaKnown RBP25.69■■□□□ 1.7
TNFAIP3-204ENST00000433680 ABCC8Q09428 1581 aa25.69■■□□□ 1.7
TNFAIP3-204ENST00000433680 DNMBPQ6XZF7 1577 aa25.61■■□□□ 1.69
TNFAIP3-204ENST00000433680 TOPBP1Q92547 1522 aa25.6■■□□□ 1.69
TNFAIP3-204ENST00000433680 CUX1P39880 1505 aa25.47■■□□□ 1.67
TNFAIP3-204ENST00000433680 WRNQ14191 1432 aaPredicted RBP eCLIP25.43■■□□□ 1.66
TNFAIP3-204ENST00000433680 IFT140Q96RY7 1462 aa25.4■■□□□ 1.66
TNFAIP3-204ENST00000433680 POLA1P09884 1462 aaPredicted RBP25.4■■□□□ 1.66
TNFAIP3-204ENST00000433680 BIVM-ERCC5R4GMW8 1640 aa25.38■■□□□ 1.65
TNFAIP3-204ENST00000433680 CHIC1Q5VXU3 224 aa25.38■■□□□ 1.65
TNFAIP3-204ENST00000433680 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
TNFAIP3-204ENST00000433680 FGD5Q6ZNL6 1462 aa25.36■■□□□ 1.65
TNFAIP3-204ENST00000433680 SYNJ1O43426 1573 aa25.34■■□□□ 1.65
TNFAIP3-204ENST00000433680 TARBP1Q13395 1621 aaKnown RBP25.31■■□□□ 1.64
TNFAIP3-204ENST00000433680 SOGA1O94964 1423 aa25.3■■□□□ 1.64
TNFAIP3-204ENST00000433680 RAD54L2Q9Y4B4 1467 aa25.24■■□□□ 1.63
TNFAIP3-204ENST00000433680 WDR97A6NE52 1622 aa25.21■■□□□ 1.63
TNFAIP3-204ENST00000433680 ZNF608Q9ULD9 1512 aaPredicted RBP25.2■■□□□ 1.62
TNFAIP3-204ENST00000433680 EIF4G3O43432 1585 aaKnown RBP25.16■■□□□ 1.62
TNFAIP3-204ENST00000433680 ABCA10Q8WWZ4 1543 aa25.16■■□□□ 1.62
TNFAIP3-204ENST00000433680 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.612e-13■■■□□ 16
TNFAIP3-204ENST00000433680 TDRD9Q8NDG6 1382 aaKnown RBP25.09■■□□□ 1.61
TNFAIP3-204ENST00000433680 ABCA5Q8WWZ7 1642 aa25.04■■□□□ 1.6
TNFAIP3-204ENST00000433680 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
TNFAIP3-204ENST00000433680 GRIN2BQ13224 1484 aa24.99■■□□□ 1.59
TNFAIP3-204ENST00000433680 TRIM41Q8WV44 630 aa24.99■■□□□ 1.59
TNFAIP3-204ENST00000433680 PBRM1Q86U86 1689 aa24.97■■□□□ 1.59
TNFAIP3-204ENST00000433680 MAGI1Q96QZ7 1491 aaPredicted RBP24.92■■□□□ 1.58
TNFAIP3-204ENST00000433680 KIF27Q86VH2 1401 aa24.9■■□□□ 1.58
TNFAIP3-204ENST00000433680 SNAPC4Q5SXM2 1469 aa24.89■■□□□ 1.58
TNFAIP3-204ENST00000433680 ERICH3Q5RHP9 1530 aa24.88■■□□□ 1.57
TNFAIP3-204ENST00000433680 SYNJ2O15056 1496 aa24.81■■□□□ 1.56
TNFAIP3-204ENST00000433680 CHD1O14646 1710 aa24.8■■□□□ 1.56
TNFAIP3-204ENST00000433680 OSCARQ8IYS5 282 aa24.77■■□□□ 1.56
TNFAIP3-204ENST00000433680 ADAMTS12P58397 1594 aa24.76■■□□□ 1.55
TNFAIP3-204ENST00000433680 CHMP7Q8WUX9 453 aaPredicted RBP24.76■■□□□ 1.55
TNFAIP3-204ENST00000433680 FBLN2P98095 1184 aa24.75■■□□□ 1.55
TNFAIP3-204ENST00000433680 FHAD1B1AJZ9 1412 aa24.75■■□□□ 1.55
TNFAIP3-204ENST00000433680 IGF1RP08069 1367 aa24.74■■□□□ 1.55
TNFAIP3-204ENST00000433680 CUL7Q14999 1698 aa24.72■■□□□ 1.55
TNFAIP3-204ENST00000433680 DNAJC5Q9H3Z4 198 aa24.68■■□□□ 1.54
TNFAIP3-204ENST00000433680 RUSC2Q8N2Y8 1516 aa24.67■■□□□ 1.54
TNFAIP3-204ENST00000433680 GRIN2AQ12879 1464 aa24.66■■□□□ 1.54
TNFAIP3-204ENST00000433680 EEA1Q15075 1411 aa24.63■■□□□ 1.53
TNFAIP3-204ENST00000433680 CARMIL1Q5VZK9 1371 aa24.6■■□□□ 1.53
TNFAIP3-204ENST00000433680 CLASP1Q7Z460 1538 aa24.54■■□□□ 1.52
TNFAIP3-204ENST00000433680 NUP160Q12769 1436 aa24.53■■□□□ 1.52
TNFAIP3-204ENST00000433680 CEP170Q5SW79 1584 aa24.51■■□□□ 1.51
TNFAIP3-204ENST00000433680 CSRNP3Q8WYN3 585 aa24.51■■□□□ 1.51
TNFAIP3-204ENST00000433680 RAPGEF2Q9Y4G8 1499 aa24.51■■□□□ 1.51
TNFAIP3-204ENST00000433680 PRXQ9BXM0 1461 aa24.47■■□□□ 1.51
TNFAIP3-204ENST00000433680 FAM9AQ8IZU1 332 aaPredicted RBP24.39■■□□□ 1.49
TNFAIP3-204ENST00000433680 KIAA0586Q9BVV6 1533 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms