RNA–Protein interactions for RNA: ENST00000497277.1

SEC62-210, Transcript of SEC62 homolog, preprotein translocation factor, humanhuman

TSL 1 (best)

Gene SEC62, Length 525 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC62-210ENST00000497277 AEBP2Q6ZN18 517 aaPredicted RBP23.68■■□□□ 1.38
SEC62-210ENST00000497277 CHIC1Q5VXU3 224 aa22.91■■□□□ 1.26
SEC62-210ENST00000497277 SENP3Q9H4L4 574 aaPredicted RBP20.17■□□□□ 0.82
SEC62-210ENST00000497277 PHF23Q9BUL5 403 aaPredicted RBP20.09■□□□□ 0.81
SEC62-210ENST00000497277 POTEDQ86YR6 584 aa19.18■□□□□ 0.66
SEC62-210ENST00000497277 FOXD1Q16676 465 aa18.72■□□□□ 0.59
SEC62-210ENST00000497277 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
SEC62-210ENST00000497277 MSH5O43196 834 aa17.81■□□□□ 0.44
SEC62-210ENST00000497277 PPP6R1Q9UPN7 881 aa17.8■□□□□ 0.44
SEC62-210ENST00000497277 ADRA2BP18089 450 aa17.75■□□□□ 0.43
SEC62-210ENST00000497277 PIAS4Q8N2W9 510 aaPredicted RBP17.57■□□□□ 0.4
SEC62-210ENST00000497277 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
SEC62-210ENST00000497277 PPP4R3CPQ6ZMV5 832 aa16.24■□□□□ 0.19
SEC62-210ENST00000497277 MAPK8IP2Q13387 824 aaPredicted RBP16.18■□□□□ 0.18
SEC62-210ENST00000497277 DMRT2Q9Y5R5 561 aa16.06■□□□□ 0.16
SEC62-210ENST00000497277 CACNB1Q02641 598 aaPredicted RBP15.88■□□□□ 0.13
SEC62-210ENST00000497277 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
SEC62-210ENST00000497277 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
SEC62-210ENST00000497277 HOXD11P31277 338 aaPredicted RBP15.64■□□□□ 0.09
SEC62-210ENST00000497277 KCNA4P22459 653 aa15.63■□□□□ 0.09
SEC62-210ENST00000497277 RNF216Q9NWF9 866 aaPredicted RBP15.63■□□□□ 0.09
SEC62-210ENST00000497277 NPM3O75607 178 aaKnown RBP15.51■□□□□ 0.07
SEC62-210ENST00000497277 DCAF8L1A6NGE4 600 aa15.3■□□□□ 0.04
SEC62-210ENST00000497277 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
SEC62-210ENST00000497277 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
SEC62-210ENST00000497277 SLC4A1APQ9BWU0 796 aaKnown RBP14.93□□□□□ -0.02
SEC62-210ENST00000497277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.85□□□□□ -0.036e-10■□□□□ 10.8
SEC62-210ENST00000497277 C1QBPQ07021 282 aaKnown RBP14.83□□□□□ -0.04
SEC62-210ENST00000497277 POTEHQ6S545 545 aa14.8□□□□□ -0.04
SEC62-210ENST00000497277 SLC4A2P04920 1241 aa14.71□□□□□ -0.05
SEC62-210ENST00000497277 U3KPZ7 1027 aaPredicted RBP14.6□□□□□ -0.07
SEC62-210ENST00000497277 EHMT2Q96KQ7 1210 aa14.46□□□□□ -0.09
SEC62-210ENST00000497277 FOXD4L1Q9NU39 408 aa14.43□□□□□ -0.1
SEC62-210ENST00000497277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.37□□□□□ -0.11
SEC62-210ENST00000497277 HNRNPUL2Q1KMD3 747 aaKnown RBP14.37□□□□□ -0.11
SEC62-210ENST00000497277 ZBTB22O15209 634 aa14.36□□□□□ -0.11
SEC62-210ENST00000497277 MYCNP04198 464 aaPredicted RBP14.36□□□□□ -0.11
SEC62-210ENST00000497277 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
SEC62-210ENST00000497277 SAMD1Q6SPF0 538 aaPredicted RBP14.29□□□□□ -0.12
SEC62-210ENST00000497277 APLP2Q06481 763 aa14.28□□□□□ -0.12
SEC62-210ENST00000497277 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
SEC62-210ENST00000497277 CAPN15O75808 1086 aa14.19□□□□□ -0.14
SEC62-210ENST00000497277 ZNF219Q9P2Y4 722 aaPredicted RBP14.11□□□□□ -0.15
SEC62-210ENST00000497277 TRHP20396 242 aaPredicted RBP14.06□□□□□ -0.16
SEC62-210ENST00000497277 DSG3P32926 999 aa14.06□□□□□ -0.16
SEC62-210ENST00000497277 ATXN8OSP0DMR3 200 aa14□□□□□ -0.17
SEC62-210ENST00000497277 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
SEC62-210ENST00000497277 ABCB7O75027 752 aa13.88□□□□□ -0.19
SEC62-210ENST00000497277 POLA2Q14181 598 aa13.79□□□□□ -0.2
SEC62-210ENST00000497277 ZBTB12Q9Y330 459 aaPredicted RBP13.6□□□□□ -0.23
SEC62-210ENST00000497277 RBM42Q9BTD8 480 aaKnown RBP13.43□□□□□ -0.26
SEC62-210ENST00000497277 FBLN2P98095 1184 aa13.41□□□□□ -0.26
SEC62-210ENST00000497277 SP7Q8TDD2 431 aaPredicted RBP13.39□□□□□ -0.27
SEC62-210ENST00000497277 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
SEC62-210ENST00000497277 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
SEC62-210ENST00000497277 CHRDL2Q6WN34 429 aa13.32□□□□□ -0.28
SEC62-210ENST00000497277 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
SEC62-210ENST00000497277 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
SEC62-210ENST00000497277 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
SEC62-210ENST00000497277 AKT1S1Q96B36 256 aa13.2□□□□□ -0.3
SEC62-210ENST00000497277 ZNF692Q9BU19 519 aaPredicted RBP13.08□□□□□ -0.32
SEC62-210ENST00000497277 SSUH2Q9Y2M2 353 aa13.07□□□□□ -0.32
SEC62-210ENST00000497277 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
SEC62-210ENST00000497277 FKBP8Q14318 412 aa12.95□□□□□ -0.34
SEC62-210ENST00000497277 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
SEC62-210ENST00000497277 PITPNM1O00562 1244 aa12.89□□□□□ -0.35
SEC62-210ENST00000497277 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
SEC62-210ENST00000497277 SPDYE1Q8NFV5 336 aaPredicted RBP12.86□□□□□ -0.35
SEC62-210ENST00000497277 PIP4P2Q8N4L2 257 aa12.8□□□□□ -0.36
SEC62-210ENST00000497277 PROM2Q8N271 834 aa12.78□□□□□ -0.36
SEC62-210ENST00000497277 HAX1O00165 279 aa12.77□□□□□ -0.37
SEC62-210ENST00000497277 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
SEC62-210ENST00000497277 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.376e-13■□□□□ 8.5
SEC62-210ENST00000497277 STAG3Q9UJ98 1225 aa12.67□□□□□ -0.38
SEC62-210ENST00000497277 PRR29P0C7W0 189 aa12.65□□□□□ -0.38
SEC62-210ENST00000497277 EVX2Q03828 476 aa12.65□□□□□ -0.38
SEC62-210ENST00000497277 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
SEC62-210ENST00000497277 PRKAR2AP13861 404 aaKnown RBP12.56□□□□□ -0.4
SEC62-210ENST00000497277 PLSCR2Q9NRY7 297 aa12.54□□□□□ -0.4
SEC62-210ENST00000497277 LHX8Q68G74 356 aa12.53□□□□□ -0.4
SEC62-210ENST00000497277 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
SEC62-210ENST00000497277 CREBZFQ9NS37 354 aa12.43□□□□□ -0.42
SEC62-210ENST00000497277 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
SEC62-210ENST00000497277 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
SEC62-210ENST00000497277 C19orf67A6NJJ6 358 aa12.31□□□□□ -0.44
SEC62-210ENST00000497277 MNX1P50219 401 aaPredicted RBP12.29□□□□□ -0.44
SEC62-210ENST00000497277 MIER1Q8N108 512 aa12.27□□□□□ -0.45
SEC62-210ENST00000497277 GABBR2O75899 941 aa12.26□□□□□ -0.45
SEC62-210ENST00000497277 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
SEC62-210ENST00000497277 PLCD3Q8N3E9 789 aa12.24□□□□□ -0.45
SEC62-210ENST00000497277 NPM1P06748 294 aaKnown RBP eCLIP12.23□□□□□ -0.45
SEC62-210ENST00000497277 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
SEC62-210ENST00000497277 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
SEC62-210ENST00000497277 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
SEC62-210ENST00000497277 KLHL34Q8N239 644 aa12.11□□□□□ -0.47
SEC62-210ENST00000497277 PAK3O75914 559 aaPredicted RBP12.08□□□□□ -0.48
SEC62-210ENST00000497277 ZRANB1Q9UGI0 708 aa12.08□□□□□ -0.48
SEC62-210ENST00000497277 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
SEC62-210ENST00000497277 POTEIP0CG38 1075 aa12.05□□□□□ -0.48
SEC62-210ENST00000497277 ZNF579Q8NAF0 562 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms