RNA–Protein interactions for RNA: ENST00000304330.8

RPAP1-201, Transcript of RNA polymerase II associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAP1, Length 4,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-201ENST00000304330 NISCHQ9Y2I1 1504 aa20.97■□□□□ 0.95
RPAP1-201ENST00000304330 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.76
RPAP1-201ENST00000304330 SUPT5HO00267 1087 aaKnown RBP19.31■□□□□ 0.68
RPAP1-201ENST00000304330 SHROOM4Q9ULL8 1493 aa19.09■□□□□ 0.65
RPAP1-201ENST00000304330 ZEB1P37275 1124 aaPredicted RBP18.23■□□□□ 0.51
RPAP1-201ENST00000304330 PCGF6Q9BYE7 350 aa18.19■□□□□ 0.5
RPAP1-201ENST00000304330 APLP2Q06481 763 aa18.11■□□□□ 0.49
RPAP1-201ENST00000304330 TRIM41Q8WV44 630 aa18.1■□□□□ 0.49
RPAP1-201ENST00000304330 EHMT2Q96KQ7 1210 aa18.02■□□□□ 0.47
RPAP1-201ENST00000304330 PELP1Q8IZL8 1130 aaKnown RBP18.01■□□□□ 0.47
RPAP1-201ENST00000304330 FAM9AQ8IZU1 332 aaPredicted RBP18.01■□□□□ 0.47
RPAP1-201ENST00000304330 CHIC1Q5VXU3 224 aa17.88■□□□□ 0.45
RPAP1-201ENST00000304330 TRIM26Q12899 539 aaPredicted RBP17.81■□□□□ 0.44
RPAP1-201ENST00000304330 HRCP23327 699 aa17.78■□□□□ 0.44
RPAP1-201ENST00000304330 CENPBP07199 599 aaPredicted RBP17.77■□□□□ 0.43
RPAP1-201ENST00000304330 CCER1Q8TC90 406 aaPredicted RBP17.72■□□□□ 0.43
RPAP1-201ENST00000304330 UBTFP17480 764 aaKnown RBP17.62■□□□□ 0.41
RPAP1-201ENST00000304330 ZCCHC6Q5VYS8 1495 aaKnown RBP17.52■□□□□ 0.4
RPAP1-201ENST00000304330 TTBK1Q5TCY1 1321 aaPredicted RBP17.5■□□□□ 0.39
RPAP1-201ENST00000304330 CCDC180Q9P1Z9 1646 aa17.48■□□□□ 0.39
RPAP1-201ENST00000304330 LOC105371045A0A1W2PR82 267 aa17.45■□□□□ 0.38
RPAP1-201ENST00000304330 MYT1Q01538 1121 aa17.32■□□□□ 0.36
RPAP1-201ENST00000304330 RANGAP1P46060 587 aaPredicted RBP17.29■□□□□ 0.36
RPAP1-201ENST00000304330 PPARGC1BQ86YN6 1023 aaKnown RBP17.17■□□□□ 0.34
RPAP1-201ENST00000304330 ABCC9O60706 1549 aa17.16■□□□□ 0.34
RPAP1-201ENST00000304330 DCAF1Q9Y4B6 1507 aa17.15■□□□□ 0.34
RPAP1-201ENST00000304330 ATP1B4Q9UN42 357 aaPredicted RBP17.14■□□□□ 0.33
RPAP1-201ENST00000304330 NEFLP07196 543 aa17.11■□□□□ 0.33
RPAP1-201ENST00000304330 YTHDC1Q96MU7 727 aaKnown RBP17■□□□□ 0.31
RPAP1-201ENST00000304330 ERICH6Q7L0X2 663 aa16.97■□□□□ 0.31
RPAP1-201ENST00000304330 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
RPAP1-201ENST00000304330 DIEXFQ68CQ4 756 aaKnown RBP16.95■□□□□ 0.3
RPAP1-201ENST00000304330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.94■□□□□ 0.3
RPAP1-201ENST00000304330 SCRIBQ14160 1630 aa16.91■□□□□ 0.3
RPAP1-201ENST00000304330 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
RPAP1-201ENST00000304330 ITGAEP38570 1179 aa16.8■□□□□ 0.28
RPAP1-201ENST00000304330 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
RPAP1-201ENST00000304330 ZNF316A6NFI3 1004 aaPredicted RBP16.73■□□□□ 0.27
RPAP1-201ENST00000304330 RSF1Q96T23 1441 aaPredicted RBP16.72■□□□□ 0.27
RPAP1-201ENST00000304330 NACADO15069 1562 aa16.72■□□□□ 0.27
RPAP1-201ENST00000304330 EEA1Q15075 1411 aa16.68■□□□□ 0.26
RPAP1-201ENST00000304330 RB1CC1Q8TDY2 1594 aa16.65■□□□□ 0.26
RPAP1-201ENST00000304330 MYO15BQ96JP2 1530 aa16.63■□□□□ 0.25
RPAP1-201ENST00000304330 FAM50AQ14320 339 aaKnown RBP16.59■□□□□ 0.25
RPAP1-201ENST00000304330 CLSPNQ9HAW4 1339 aa16.58■□□□□ 0.24
RPAP1-201ENST00000304330 ACIN1Q9UKV3 1341 aaKnown RBP16.57■□□□□ 0.24
RPAP1-201ENST00000304330 GTF3C3Q9Y5Q9 886 aa16.53■□□□□ 0.24
RPAP1-201ENST00000304330 ANP32CO43423 234 aa16.46■□□□□ 0.23
RPAP1-201ENST00000304330 BAZ1AQ9NRL2 1556 aaPredicted RBP16.45■□□□□ 0.22
RPAP1-201ENST00000304330 GOLGA3Q08378 1498 aa16.44■□□□□ 0.22
RPAP1-201ENST00000304330 TNIKQ9UKE5 1360 aa16.4■□□□□ 0.22
RPAP1-201ENST00000304330 NEUROD1Q13562 356 aa16.4■□□□□ 0.22
RPAP1-201ENST00000304330 TRIM52Q96A61 297 aa16.4■□□□□ 0.22
RPAP1-201ENST00000304330 CLIP1P30622 1438 aa16.39■□□□□ 0.21
RPAP1-201ENST00000304330 POLR3GLQ9BT43 218 aa16.37■□□□□ 0.21
RPAP1-201ENST00000304330 CEP162Q5TB80 1403 aa16.37■□□□□ 0.21
RPAP1-201ENST00000304330 WRNQ14191 1432 aaPredicted RBP eCLIP16.33■□□□□ 0.21
RPAP1-201ENST00000304330 DAXXQ9UER7 740 aaPredicted RBP16.32■□□□□ 0.2
RPAP1-201ENST00000304330 CEP164Q9UPV0 1460 aa16.31■□□□□ 0.2
RPAP1-201ENST00000304330 CDK11AQ9UQ88 783 aaPredicted RBP16.26■□□□□ 0.19
RPAP1-201ENST00000304330 MYT1LQ9UL68 1186 aa16.24■□□□□ 0.19
RPAP1-201ENST00000304330 BAZ1BQ9UIG0 1483 aaKnown RBP16.22■□□□□ 0.19
RPAP1-201ENST00000304330 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
RPAP1-201ENST00000304330 TONSLQ96HA7 1378 aa16.22■□□□□ 0.19
RPAP1-201ENST00000304330 P3H3Q8IVL6 736 aa16.19■□□□□ 0.18
RPAP1-201ENST00000304330 KIF27Q86VH2 1401 aa16.16■□□□□ 0.18
RPAP1-201ENST00000304330 RTL5Q5HYW3 569 aaPredicted RBP16.15■□□□□ 0.18
RPAP1-201ENST00000304330 MROH2BQ7Z745 1585 aa16.13■□□□□ 0.17
RPAP1-201ENST00000304330 BCANQ96GW7 911 aa16.07■□□□□ 0.16
RPAP1-201ENST00000304330 CNGB1Q14028 1251 aaPredicted RBP16.07■□□□□ 0.16
RPAP1-201ENST00000304330 MTUS2Q5JR59 1369 aa16.07■□□□□ 0.16
RPAP1-201ENST00000304330 SCAF1Q9H7N4 1312 aaKnown RBP16.06■□□□□ 0.16
RPAP1-201ENST00000304330 TOP2AP11388 1531 aaKnown RBP16.05■□□□□ 0.16
RPAP1-201ENST00000304330 CCDC88BA6NC98 1476 aa16.03■□□□□ 0.16
RPAP1-201ENST00000304330 ZNF326Q5BKZ1 582 aaKnown RBP16.03■□□□□ 0.16
RPAP1-201ENST00000304330 MIER1Q8N108 512 aa16.02■□□□□ 0.15
RPAP1-201ENST00000304330 DDX10Q13206 875 aaKnown RBP16■□□□□ 0.15
RPAP1-201ENST00000304330 VPS8Q8N3P4 1428 aa16■□□□□ 0.15
RPAP1-201ENST00000304330 SMARCA2P51531 1590 aa15.99■□□□□ 0.15
RPAP1-201ENST00000304330 FBLN2P98095 1184 aa15.98■□□□□ 0.15
RPAP1-201ENST00000304330 SOGA1O94964 1423 aa15.98■□□□□ 0.15
RPAP1-201ENST00000304330 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
RPAP1-201ENST00000304330 TIMELESSQ9UNS1 1208 aa15.96■□□□□ 0.15
RPAP1-201ENST00000304330 FKBP8Q14318 412 aa15.95■□□□□ 0.14
RPAP1-201ENST00000304330 HNRNPUQ00839 825 aaKnown RBP eCLIP15.92■□□□□ 0.14
RPAP1-201ENST00000304330 SLC4A1APQ9BWU0 796 aaKnown RBP15.91■□□□□ 0.14
RPAP1-201ENST00000304330 CCNB3Q8WWL7 1395 aa15.9■□□□□ 0.14
RPAP1-201ENST00000304330 ZNF777Q9ULD5 760 aaPredicted RBP15.9■□□□□ 0.14
RPAP1-201ENST00000304330 WIZO95785 1651 aa15.89■□□□□ 0.13
RPAP1-201ENST00000304330 ANP32AP39687 249 aaKnown RBP15.89■□□□□ 0.13
RPAP1-201ENST00000304330 EIF4G2P78344 907 aaKnown RBP eCLIP15.87■□□□□ 0.13
RPAP1-201ENST00000304330 ABCC8Q09428 1581 aa15.87■□□□□ 0.13
RPAP1-201ENST00000304330 ARID3CA6NKF2 412 aa15.85■□□□□ 0.13
RPAP1-201ENST00000304330 TSPY4P0CV99 314 aa15.83■□□□□ 0.12
RPAP1-201ENST00000304330 TSPY10P0CW01 314 aa15.83■□□□□ 0.12
RPAP1-201ENST00000304330 CARMIL1Q5VZK9 1371 aa15.82■□□□□ 0.12
RPAP1-201ENST00000304330 SMARCA4P51532 1647 aa15.81■□□□□ 0.12
RPAP1-201ENST00000304330 CHIC2Q9UKJ5 165 aa15.8■□□□□ 0.12
RPAP1-201ENST00000304330 CUX2O14529 1486 aa15.79■□□□□ 0.12
RPAP1-201ENST00000304330 MRS2Q9HD23 443 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms