RNA–Protein interactions for RNA: ENST00000561603.5

RPAP1-202, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 5 BASIC

Gene RPAP1, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-202ENST00000561603 NISCHQ9Y2I1 1504 aa17.52■□□□□ 0.4
RPAP1-202ENST00000561603 DCAF8L2P0C7V8 631 aa17.18■□□□□ 0.34
RPAP1-202ENST00000561603 SHROOM4Q9ULL8 1493 aa16.28■□□□□ 0.2
RPAP1-202ENST00000561603 SUPT5HO00267 1087 aaKnown RBP16.11■□□□□ 0.17
RPAP1-202ENST00000561603 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
RPAP1-202ENST00000561603 FAM9AQ8IZU1 332 aaPredicted RBP15.23■□□□□ 0.03
RPAP1-202ENST00000561603 TTBK1Q5TCY1 1321 aaPredicted RBP15.04■□□□□ -0
RPAP1-202ENST00000561603 ABCC9O60706 1549 aa15.01□□□□□ -0.01
RPAP1-202ENST00000561603 RANGAP1P46060 587 aaPredicted RBP14.99□□□□□ -0.01
RPAP1-202ENST00000561603 PABPN1Q86U42 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
RPAP1-202ENST00000561603 PPARGC1BQ86YN6 1023 aaKnown RBP14.72□□□□□ -0.05
RPAP1-202ENST00000561603 CCDC180Q9P1Z9 1646 aa14.7□□□□□ -0.06
RPAP1-202ENST00000561603 ZCCHC6Q5VYS8 1495 aaKnown RBP14.7□□□□□ -0.06
RPAP1-202ENST00000561603 TRIM41Q8WV44 630 aa14.64□□□□□ -0.07
RPAP1-202ENST00000561603 LOC105371045A0A1W2PR82 267 aa14.57□□□□□ -0.08
RPAP1-202ENST00000561603 PCGF6Q9BYE7 350 aa14.52□□□□□ -0.09
RPAP1-202ENST00000561603 ATP1B4Q9UN42 357 aaPredicted RBP14.47□□□□□ -0.09
RPAP1-202ENST00000561603 UBTFP17480 764 aaKnown RBP14.41□□□□□ -0.1
RPAP1-202ENST00000561603 CHIC1Q5VXU3 224 aa14.37□□□□□ -0.11
RPAP1-202ENST00000561603 APLP2Q06481 763 aa14.24□□□□□ -0.13
RPAP1-202ENST00000561603 SCRIBQ14160 1630 aa14.2□□□□□ -0.14
RPAP1-202ENST00000561603 DCAF1Q9Y4B6 1507 aa14.11□□□□□ -0.15
RPAP1-202ENST00000561603 ITGAEP38570 1179 aa14.1□□□□□ -0.15
RPAP1-202ENST00000561603 MYO15BQ96JP2 1530 aa14.03□□□□□ -0.16
RPAP1-202ENST00000561603 ARID3CA6NKF2 412 aa13.97□□□□□ -0.17
RPAP1-202ENST00000561603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.17
RPAP1-202ENST00000561603 HNRNPUL2Q1KMD3 747 aaKnown RBP13.96□□□□□ -0.17
RPAP1-202ENST00000561603 CCER1Q8TC90 406 aaPredicted RBP13.93□□□□□ -0.18
RPAP1-202ENST00000561603 FBLN2P98095 1184 aa13.93□□□□□ -0.18
RPAP1-202ENST00000561603 RSF1Q96T23 1441 aaPredicted RBP13.91□□□□□ -0.18
RPAP1-202ENST00000561603 P3H3Q8IVL6 736 aa13.9□□□□□ -0.18
RPAP1-202ENST00000561603 NACADO15069 1562 aa13.83□□□□□ -0.2
RPAP1-202ENST00000561603 CECR2Q9BXF3 1484 aa13.82□□□□□ -0.2
RPAP1-202ENST00000561603 CNGB1Q14028 1251 aaPredicted RBP13.76□□□□□ -0.21
RPAP1-202ENST00000561603 RB1CC1Q8TDY2 1594 aa13.74□□□□□ -0.21
RPAP1-202ENST00000561603 MYT1LQ9UL68 1186 aa13.71□□□□□ -0.22
RPAP1-202ENST00000561603 HRCP23327 699 aa13.7□□□□□ -0.22
RPAP1-202ENST00000561603 MROH2BQ7Z745 1585 aa13.68□□□□□ -0.22
RPAP1-202ENST00000561603 TRIM26Q12899 539 aaPredicted RBP13.65□□□□□ -0.22
RPAP1-202ENST00000561603 YTHDC1Q96MU7 727 aaKnown RBP13.62□□□□□ -0.23
RPAP1-202ENST00000561603 FAM50AQ14320 339 aaKnown RBP13.59□□□□□ -0.23
RPAP1-202ENST00000561603 CSRNP3Q8WYN3 585 aa13.58□□□□□ -0.24
RPAP1-202ENST00000561603 WIZO95785 1651 aa13.57□□□□□ -0.24
RPAP1-202ENST00000561603 POLR3GLQ9BT43 218 aa13.55□□□□□ -0.24
RPAP1-202ENST00000561603 BAZ1AQ9NRL2 1556 aaPredicted RBP13.51□□□□□ -0.25
RPAP1-202ENST00000561603 NEUROD1Q13562 356 aa13.44□□□□□ -0.26
RPAP1-202ENST00000561603 ZNF777Q9ULD5 760 aaPredicted RBP13.41□□□□□ -0.26
RPAP1-202ENST00000561603 CCDC88BA6NC98 1476 aa13.38□□□□□ -0.27
RPAP1-202ENST00000561603 SENP3Q9H4L4 574 aaPredicted RBP13.37□□□□□ -0.27
RPAP1-202ENST00000561603 PLPPR3Q6T4P5 718 aa13.37□□□□□ -0.27
RPAP1-202ENST00000561603 ABCC8Q09428 1581 aa13.36□□□□□ -0.27
RPAP1-202ENST00000561603 TRIM52Q96A61 297 aa13.36□□□□□ -0.27
RPAP1-202ENST00000561603 SMARCA4P51532 1647 aa13.34□□□□□ -0.27
RPAP1-202ENST00000561603 ZNF326Q5BKZ1 582 aaKnown RBP13.33□□□□□ -0.28
RPAP1-202ENST00000561603 ZEB1P37275 1124 aaPredicted RBP13.32□□□□□ -0.28
RPAP1-202ENST00000561603 DNAJC5BQ9UF47 199 aa13.31□□□□□ -0.28
RPAP1-202ENST00000561603 BAZ1BQ9UIG0 1483 aaKnown RBP13.3□□□□□ -0.28
RPAP1-202ENST00000561603 TOP2AP11388 1531 aaKnown RBP13.3□□□□□ -0.28
RPAP1-202ENST00000561603 CHIC2Q9UKJ5 165 aa13.3□□□□□ -0.28
RPAP1-202ENST00000561603 SOGA1O94964 1423 aa13.27□□□□□ -0.29
RPAP1-202ENST00000561603 CHMP7Q8WUX9 453 aaPredicted RBP13.23□□□□□ -0.29
RPAP1-202ENST00000561603 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
RPAP1-202ENST00000561603 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
RPAP1-202ENST00000561603 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
RPAP1-202ENST00000561603 KCNH8Q96L42 1107 aa13.19□□□□□ -0.3
RPAP1-202ENST00000561603 HIRIP3Q9BW71 556 aaPredicted RBP13.17□□□□□ -0.3
RPAP1-202ENST00000561603 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
RPAP1-202ENST00000561603 CEP162Q5TB80 1403 aa13.16□□□□□ -0.3
RPAP1-202ENST00000561603 RUSC2Q8N2Y8 1516 aa13.16□□□□□ -0.3
RPAP1-202ENST00000561603 BICRAQ9NZM4 1560 aa13.15□□□□□ -0.3
RPAP1-202ENST00000561603 ATAD2BQ9ULI0 1458 aa13.15□□□□□ -0.3
RPAP1-202ENST00000561603 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
RPAP1-202ENST00000561603 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
RPAP1-202ENST00000561603 PELP1Q8IZL8 1130 aaKnown RBP13.09□□□□□ -0.31
RPAP1-202ENST00000561603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.09□□□□□ -0.31
RPAP1-202ENST00000561603 ERCC6Q03468 1493 aa13.07□□□□□ -0.32
RPAP1-202ENST00000561603 TNIKQ9UKE5 1360 aa13.07□□□□□ -0.32
RPAP1-202ENST00000561603 EEA1Q15075 1411 aa13.06□□□□□ -0.32
RPAP1-202ENST00000561603 GOLGA3Q08378 1498 aa13.06□□□□□ -0.32
RPAP1-202ENST00000561603 RRP7BPQ9NSQ0 103 aa13.06□□□□□ -0.32
RPAP1-202ENST00000561603 SENP3-EIF4A1A0A087X0R7 540 aa13.06□□□□□ -0.32
RPAP1-202ENST00000561603 DIEXFQ68CQ4 756 aaKnown RBP13.05□□□□□ -0.32
RPAP1-202ENST00000561603 CLIP1P30622 1438 aa13.04□□□□□ -0.32
RPAP1-202ENST00000561603 CHGAP10645 457 aaKnown RBP13□□□□□ -0.33
RPAP1-202ENST00000561603 CUX2O14529 1486 aa12.99□□□□□ -0.33
RPAP1-202ENST00000561603 CEP164Q9UPV0 1460 aa12.98□□□□□ -0.33
RPAP1-202ENST00000561603 KANK4Q5T7N3 995 aaPredicted RBP12.96□□□□□ -0.33
RPAP1-202ENST00000561603 CENPBP07199 599 aaPredicted RBP12.96□□□□□ -0.34
RPAP1-202ENST00000561603 KDM2AQ9Y2K7 1162 aa12.94□□□□□ -0.34
RPAP1-202ENST00000561603 BCANQ96GW7 911 aa12.94□□□□□ -0.34
RPAP1-202ENST00000561603 MTUS2Q5JR59 1369 aa12.94□□□□□ -0.34
RPAP1-202ENST00000561603 EIF4G1Q04637 1599 aaKnown RBP12.93□□□□□ -0.34
RPAP1-202ENST00000561603 SYNJ1O43426 1573 aa12.93□□□□□ -0.34
RPAP1-202ENST00000561603 PLEKHG5O94827 1062 aa12.93□□□□□ -0.34
RPAP1-202ENST00000561603 NPM1P06748 294 aaKnown RBP eCLIP12.91□□□□□ -0.34
RPAP1-202ENST00000561603 RAPGEF2Q9Y4G8 1499 aa12.91□□□□□ -0.34
RPAP1-202ENST00000561603 KIF27Q86VH2 1401 aa12.9□□□□□ -0.34
RPAP1-202ENST00000561603 CDK11AQ9UQ88 783 aaPredicted RBP12.89□□□□□ -0.35
RPAP1-202ENST00000561603 CARMIL1Q5VZK9 1371 aa12.89□□□□□ -0.35
RPAP1-202ENST00000561603 SIN3AQ96ST3 1273 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms