Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT4P19013 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT4P19013 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT4P19013 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
KRT4P19013 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT4P19013 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT4P19013 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT4P19013 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
KRT4P19013 MIR4466-201ENST00000606121 54 ntBASIC20.72■□□□□ 0.91
KRT4P19013 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT4P19013 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT4P19013 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT4P19013 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT4P19013 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT4P19013 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT4P19013 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT4P19013 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT4P19013 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT4P19013 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT4P19013 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT4P19013 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.71■□□□□ 0.91
KRT4P19013 AC133561.4-201ENST00000566112 224 ntBASIC20.71■□□□□ 0.91
KRT4P19013 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT4P19013 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT4P19013 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT4P19013 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
KRT4P19013 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT4P19013 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
KRT4P19013 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT4P19013 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT4P19013 AC055733.4-201ENST00000638462 1354 ntBASIC20.71■□□□□ 0.91
KRT4P19013 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT4P19013 AC009237.3-201ENST00000393279 1427 ntBASIC20.7■□□□□ 0.9
KRT4P19013 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT4P19013 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT4P19013 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT4P19013 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.7■□□□□ 0.9
KRT4P19013 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
KRT4P19013 BX005040.4-201ENST00000637145 1518 ntBASIC20.7■□□□□ 0.9
KRT4P19013 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT4P19013 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.7■□□□□ 0.9
KRT4P19013 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.7■□□□□ 0.9
KRT4P19013 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
KRT4P19013 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT4P19013 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT4P19013 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT4P19013 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT4P19013 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT4P19013 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT4P19013 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.69■□□□□ 0.9
KRT4P19013 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KRT4P19013 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT4P19013 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT4P19013 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT4P19013 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
KRT4P19013 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.69■□□□□ 0.9
KRT4P19013 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.69■□□□□ 0.9
KRT4P19013 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.69■□□□□ 0.9
KRT4P19013 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT4P19013 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT4P19013 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
KRT4P19013 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT4P19013 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT4P19013 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.69■□□□□ 0.9
KRT4P19013 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT4P19013 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT4P19013 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT4P19013 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
KRT4P19013 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT4P19013 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT4P19013 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT4P19013 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT4P19013 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT4P19013 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
KRT4P19013 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT4P19013 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
KRT4P19013 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT4P19013 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT4P19013 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT4P19013 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.67■□□□□ 0.9
KRT4P19013 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT4P19013 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
KRT4P19013 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT4P19013 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT4P19013 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.67■□□□□ 0.9
KRT4P19013 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
KRT4P19013 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT4P19013 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
KRT4P19013 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT4P19013 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.67■□□□□ 0.9
KRT4P19013 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT4P19013 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
KRT4P19013 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT4P19013 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT4P19013 AC011484.1-201ENST00000377652 1995 ntBASIC20.66■□□□□ 0.9
KRT4P19013 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT4P19013 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
KRT4P19013 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT4P19013 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT4P19013 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms