Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 pRNA.5-201ENST00000612139 90 ntBASIC18.87■□□□□ 0.61
HTR1AP08908 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.87■□□□□ 0.61
HTR1AP08908 pRNA.11-201ENST00000618423 90 ntBASIC18.87■□□□□ 0.61
HTR1AP08908 pRNA.13-201ENST00000619112 90 ntBASIC18.87■□□□□ 0.61
HTR1AP08908 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTR1AP08908 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.87■□□□□ 0.61
HTR1AP08908 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.87■□□□□ 0.61
HTR1AP08908 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1AP08908 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.86■□□□□ 0.61
HTR1AP08908 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1AP08908 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1AP08908 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HTR1AP08908 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HTR1AP08908 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1AP08908 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1AP08908 AP000974.1-201ENST00000623909 2387 ntBASIC18.86■□□□□ 0.61
HTR1AP08908 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1AP08908 AC125437.2-201ENST00000625180 2167 ntBASIC18.86■□□□□ 0.61
HTR1AP08908 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.86■□□□□ 0.61
HTR1AP08908 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1AP08908 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.86■□□□□ 0.61
HTR1AP08908 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.86■□□□□ 0.61
HTR1AP08908 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.86■□□□□ 0.61
HTR1AP08908 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.85■□□□□ 0.61
HTR1AP08908 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1AP08908 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1AP08908 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1AP08908 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.85■□□□□ 0.61
HTR1AP08908 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1AP08908 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1AP08908 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1AP08908 TCF3P1-201ENST00000423021 1937 ntBASIC18.85■□□□□ 0.61
HTR1AP08908 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1AP08908 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1AP08908 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HTR1AP08908 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1AP08908 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HTR1AP08908 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.85■□□□□ 0.61
HTR1AP08908 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1AP08908 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.85■□□□□ 0.61
HTR1AP08908 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1AP08908 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1AP08908 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.85■□□□□ 0.61
HTR1AP08908 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HTR1AP08908 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.84■□□□□ 0.61
HTR1AP08908 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTR1AP08908 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTR1AP08908 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.84■□□□□ 0.61
HTR1AP08908 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.84■□□□□ 0.61
HTR1AP08908 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HTR1AP08908 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTR1AP08908 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTR1AP08908 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTR1AP08908 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.84■□□□□ 0.61
HTR1AP08908 AC068587.7-201ENST00000641602 218 ntBASIC18.84■□□□□ 0.61
HTR1AP08908 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTR1AP08908 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTR1AP08908 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTR1AP08908 TNXA-203ENST00000507684 2038 ntBASIC18.84■□□□□ 0.61
HTR1AP08908 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HTR1AP08908 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTR1AP08908 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTR1AP08908 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTR1AP08908 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.84■□□□□ 0.61
HTR1AP08908 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTR1AP08908 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HTR1AP08908 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.84■□□□□ 0.61
HTR1AP08908 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HTR1AP08908 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.83■□□□□ 0.61
HTR1AP08908 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HTR1AP08908 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
HTR1AP08908 AC006455.2-201ENST00000429931 906 ntBASIC18.83■□□□□ 0.6
HTR1AP08908 AC009299.2-201ENST00000482477 511 ntBASIC18.83■□□□□ 0.6
HTR1AP08908 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.83■□□□□ 0.6
HTR1AP08908 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.83■□□□□ 0.6
HTR1AP08908 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HTR1AP08908 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HTR1AP08908 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HTR1AP08908 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HTR1AP08908 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.83■□□□□ 0.6
HTR1AP08908 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HTR1AP08908 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HTR1AP08908 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HTR1AP08908 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR1AP08908 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR1AP08908 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.82■□□□□ 0.6
HTR1AP08908 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
HTR1AP08908 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HTR1AP08908 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HTR1AP08908 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR1AP08908 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR1AP08908 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
HTR1AP08908 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR1AP08908 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.82■□□□□ 0.6
HTR1AP08908 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.82■□□□□ 0.6
HTR1AP08908 RARRES2P1-201ENST00000474487 481 ntBASIC18.82■□□□□ 0.6
HTR1AP08908 AC087239.1-201ENST00000622671 572 ntBASIC18.82■□□□□ 0.6
HTR1AP08908 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR1AP08908 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
HTR1AP08908 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms