Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 SMUG1P1-201ENST00000590640 811 ntBASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 GABARAPL3-202ENST00000624044 1851 ntBASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LIN7CQ9NUP9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.17■□□□□ 0.34
LIN7CQ9NUP9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 AC027612.3-201ENST00000413684 1047 ntBASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIN7CQ9NUP9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms