Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
KCNF1Q9H3M0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KCNF1Q9H3M0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
KCNF1Q9H3M0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KCNF1Q9H3M0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
KCNF1Q9H3M0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KCNF1Q9H3M0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
KCNF1Q9H3M0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.66■■□□□ 1.22
KCNF1Q9H3M0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KCNF1Q9H3M0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 AC087239.1-201ENST00000622671 572 ntBASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KCNF1Q9H3M0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
KCNF1Q9H3M0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
KCNF1Q9H3M0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KCNF1Q9H3M0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.64■■□□□ 1.21
KCNF1Q9H3M0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
KCNF1Q9H3M0 AC010525.1-201ENST00000585559 441 ntBASIC22.64■■□□□ 1.21
KCNF1Q9H3M0 AC241377.3-202ENST00000626088 1088 ntBASIC22.64■■□□□ 1.21
KCNF1Q9H3M0 AC241585.3-202ENST00000628937 1088 ntBASIC22.64■■□□□ 1.21
KCNF1Q9H3M0 AC245100.8-202ENST00000629247 1058 ntBASIC22.64■■□□□ 1.21
KCNF1Q9H3M0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
KCNF1Q9H3M0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KCNF1Q9H3M0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
KCNF1Q9H3M0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
KCNF1Q9H3M0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
KCNF1Q9H3M0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
KCNF1Q9H3M0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNF1Q9H3M0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNF1Q9H3M0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNF1Q9H3M0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNF1Q9H3M0 BX664725.1-201ENST00000438252 379 ntBASIC22.62■■□□□ 1.21
KCNF1Q9H3M0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.62■■□□□ 1.21
KCNF1Q9H3M0 MTDHP2-201ENST00000601468 714 ntBASIC22.62■■□□□ 1.21
KCNF1Q9H3M0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.62■■□□□ 1.21
KCNF1Q9H3M0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.62■■□□□ 1.21
KCNF1Q9H3M0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
KCNF1Q9H3M0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.62■■□□□ 1.21
KCNF1Q9H3M0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KCNF1Q9H3M0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
KCNF1Q9H3M0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
KCNF1Q9H3M0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KCNF1Q9H3M0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
KCNF1Q9H3M0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.61■■□□□ 1.21
KCNF1Q9H3M0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KCNF1Q9H3M0 YBX1P4-201ENST00000392794 808 ntBASIC22.61■■□□□ 1.21
KCNF1Q9H3M0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KCNF1Q9H3M0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
KCNF1Q9H3M0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KCNF1Q9H3M0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KCNF1Q9H3M0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KCNF1Q9H3M0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KCNF1Q9H3M0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNF1Q9H3M0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
KCNF1Q9H3M0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
KCNF1Q9H3M0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNF1Q9H3M0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
KCNF1Q9H3M0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.6■■□□□ 1.21
KCNF1Q9H3M0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
KCNF1Q9H3M0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.6■■□□□ 1.21
KCNF1Q9H3M0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNF1Q9H3M0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
KCNF1Q9H3M0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
KCNF1Q9H3M0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNF1Q9H3M0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.6■■□□□ 1.21
KCNF1Q9H3M0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
KCNF1Q9H3M0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNF1Q9H3M0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNF1Q9H3M0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.59■■□□□ 1.21
KCNF1Q9H3M0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms