Protein–RNA interactions for Protein: Q96C45

ULK4, Serine/threonine-protein kinase ULK4, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ULK4Q96C45 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ULK4Q96C45 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ULK4Q96C45 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ULK4Q96C45 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ULK4Q96C45 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ULK4Q96C45 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ULK4Q96C45 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ULK4Q96C45 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.67■□□□□ 0.9
ULK4Q96C45 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.67■□□□□ 0.9
ULK4Q96C45 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ULK4Q96C45 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ULK4Q96C45 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ULK4Q96C45 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ULK4Q96C45 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ULK4Q96C45 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.67■□□□□ 0.9
ULK4Q96C45 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.67■□□□□ 0.9
ULK4Q96C45 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ULK4Q96C45 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ULK4Q96C45 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ULK4Q96C45 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ULK4Q96C45 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.67■□□□□ 0.9
ULK4Q96C45 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ULK4Q96C45 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
ULK4Q96C45 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.66■□□□□ 0.9
ULK4Q96C45 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ULK4Q96C45 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.66■□□□□ 0.9
ULK4Q96C45 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.66■□□□□ 0.9
ULK4Q96C45 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ULK4Q96C45 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.66■□□□□ 0.9
ULK4Q96C45 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.66■□□□□ 0.9
ULK4Q96C45 AC243732.1-201ENST00000612648 864 ntBASIC20.66■□□□□ 0.9
ULK4Q96C45 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.66■□□□□ 0.9
ULK4Q96C45 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ULK4Q96C45 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ULK4Q96C45 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ULK4Q96C45 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.66■□□□□ 0.9
ULK4Q96C45 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ULK4Q96C45 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
ULK4Q96C45 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
ULK4Q96C45 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ULK4Q96C45 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ULK4Q96C45 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ULK4Q96C45 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.65■□□□□ 0.9
ULK4Q96C45 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ULK4Q96C45 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ULK4Q96C45 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.65■□□□□ 0.9
ULK4Q96C45 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ULK4Q96C45 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ULK4Q96C45 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.65■□□□□ 0.9
ULK4Q96C45 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.65■□□□□ 0.9
ULK4Q96C45 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.65■□□□□ 0.9
ULK4Q96C45 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ULK4Q96C45 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.65■□□□□ 0.9
ULK4Q96C45 RARRES2P11-201ENST00000635158 484 ntBASIC20.65■□□□□ 0.9
ULK4Q96C45 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ULK4Q96C45 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.65■□□□□ 0.9
ULK4Q96C45 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
ULK4Q96C45 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ULK4Q96C45 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ULK4Q96C45 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ULK4Q96C45 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
ULK4Q96C45 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.64■□□□□ 0.89
ULK4Q96C45 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ULK4Q96C45 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.64■□□□□ 0.89
ULK4Q96C45 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ULK4Q96C45 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.64■□□□□ 0.89
ULK4Q96C45 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ULK4Q96C45 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.64■□□□□ 0.89
ULK4Q96C45 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.64■□□□□ 0.89
ULK4Q96C45 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.64■□□□□ 0.89
ULK4Q96C45 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.64■□□□□ 0.89
ULK4Q96C45 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ULK4Q96C45 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ULK4Q96C45 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ULK4Q96C45 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.64■□□□□ 0.89
ULK4Q96C45 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ULK4Q96C45 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ULK4Q96C45 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ULK4Q96C45 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.63■□□□□ 0.89
ULK4Q96C45 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ULK4Q96C45 RBM17P2-201ENST00000616397 1405 ntBASIC20.63■□□□□ 0.89
ULK4Q96C45 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ULK4Q96C45 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ULK4Q96C45 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ULK4Q96C45 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.63■□□□□ 0.89
ULK4Q96C45 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ULK4Q96C45 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ULK4Q96C45 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ULK4Q96C45 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ULK4Q96C45 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
ULK4Q96C45 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.63■□□□□ 0.89
ULK4Q96C45 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ULK4Q96C45 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.63■□□□□ 0.89
ULK4Q96C45 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ULK4Q96C45 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ULK4Q96C45 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ULK4Q96C45 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ULK4Q96C45 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ULK4Q96C45 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.62■□□□□ 0.89
ULK4Q96C45 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms