Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
POLR2JP52435 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2JP52435 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
POLR2JP52435 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2JP52435 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.81■□□□□ 0.76
POLR2JP52435 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2JP52435 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2JP52435 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2JP52435 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.81■□□□□ 0.76
POLR2JP52435 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2JP52435 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2JP52435 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2JP52435 PCDHAC2-203ENST00000615316 3011 ntBASIC19.81■□□□□ 0.76
POLR2JP52435 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2JP52435 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.81■□□□□ 0.76
POLR2JP52435 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2JP52435 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2JP52435 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2JP52435 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2JP52435 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2JP52435 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.8■□□□□ 0.76
POLR2JP52435 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
POLR2JP52435 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.8■□□□□ 0.76
POLR2JP52435 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2JP52435 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.8■□□□□ 0.76
POLR2JP52435 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.8■□□□□ 0.76
POLR2JP52435 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
POLR2JP52435 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.8■□□□□ 0.76
POLR2JP52435 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2JP52435 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
POLR2JP52435 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2JP52435 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.8■□□□□ 0.76
POLR2JP52435 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2JP52435 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.8■□□□□ 0.76
POLR2JP52435 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
POLR2JP52435 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2JP52435 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2JP52435 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.8■□□□□ 0.76
POLR2JP52435 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.8■□□□□ 0.76
POLR2JP52435 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.8■□□□□ 0.76
POLR2JP52435 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.79■□□□□ 0.76
POLR2JP52435 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.79■□□□□ 0.76
POLR2JP52435 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.79■□□□□ 0.76
POLR2JP52435 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2JP52435 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2JP52435 AC008764.7-201ENST00000593779 1081 ntBASIC19.79■□□□□ 0.76
POLR2JP52435 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.79■□□□□ 0.76
POLR2JP52435 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
POLR2JP52435 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2JP52435 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2JP52435 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2JP52435 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.79■□□□□ 0.76
POLR2JP52435 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2JP52435 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
POLR2JP52435 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2JP52435 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2JP52435 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2JP52435 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2JP52435 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2JP52435 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2JP52435 AC135279.3-201ENST00000610945 1311 ntBASIC19.78■□□□□ 0.76
POLR2JP52435 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2JP52435 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.78■□□□□ 0.76
POLR2JP52435 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2JP52435 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2JP52435 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.78■□□□□ 0.76
POLR2JP52435 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2JP52435 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.78■□□□□ 0.76
POLR2JP52435 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.78■□□□□ 0.76
POLR2JP52435 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.78■□□□□ 0.76
POLR2JP52435 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.78■□□□□ 0.76
POLR2JP52435 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2JP52435 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2JP52435 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2JP52435 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.78■□□□□ 0.76
POLR2JP52435 TSPY26P-201ENST00000476365 1326 ntBASIC19.77■□□□□ 0.76
POLR2JP52435 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.77■□□□□ 0.76
POLR2JP52435 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.77■□□□□ 0.76
POLR2JP52435 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2JP52435 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.77■□□□□ 0.76
POLR2JP52435 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.77■□□□□ 0.76
POLR2JP52435 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.77■□□□□ 0.76
POLR2JP52435 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2JP52435 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.77■□□□□ 0.76
POLR2JP52435 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.77■□□□□ 0.76
POLR2JP52435 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2JP52435 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.77■□□□□ 0.76
POLR2JP52435 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
POLR2JP52435 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
POLR2JP52435 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.76■□□□□ 0.75
POLR2JP52435 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2JP52435 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2JP52435 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2JP52435 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2JP52435 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
POLR2JP52435 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2JP52435 AL512408.1-201ENST00000569378 2000 ntBASIC19.76■□□□□ 0.75
POLR2JP52435 AFG3L1P-217ENST00000557444 2447 ntBASIC19.76■□□□□ 0.75
POLR2JP52435 AC011484.1-201ENST00000377652 1995 ntBASIC19.76■□□□□ 0.75
POLR2JP52435 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms