Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.3■□□□□ 0.2
TRGV3P03979 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV3P03979 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV3P03979 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV3P03979 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV3P03979 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV3P03979 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV3P03979 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.3■□□□□ 0.2
TRGV3P03979 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV3P03979 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV3P03979 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV3P03979 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.29■□□□□ 0.2
TRGV3P03979 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV3P03979 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.29■□□□□ 0.2
TRGV3P03979 AL024507.2-201ENST00000606070 2574 ntBASIC16.29■□□□□ 0.2
TRGV3P03979 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV3P03979 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRGV3P03979 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.29■□□□□ 0.2
TRGV3P03979 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.29■□□□□ 0.2
TRGV3P03979 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV3P03979 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV3P03979 AC245052.3-201ENST00000450182 901 ntBASIC16.29■□□□□ 0.2
TRGV3P03979 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.29■□□□□ 0.2
TRGV3P03979 AL137784.2-201ENST00000607332 1000 ntBASIC16.29■□□□□ 0.2
TRGV3P03979 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.29■□□□□ 0.2
TRGV3P03979 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV3P03979 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.29■□□□□ 0.2
TRGV3P03979 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV3P03979 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV3P03979 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV3P03979 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRGV3P03979 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV3P03979 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRGV3P03979 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV3P03979 AC026310.3-201ENST00000625186 2373 ntBASIC16.28■□□□□ 0.2
TRGV3P03979 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRGV3P03979 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV3P03979 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV3P03979 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.28■□□□□ 0.2
TRGV3P03979 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRGV3P03979 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.28■□□□□ 0.2
TRGV3P03979 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.28■□□□□ 0.2
TRGV3P03979 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.28■□□□□ 0.2
TRGV3P03979 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV3P03979 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.28■□□□□ 0.2
TRGV3P03979 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV3P03979 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV3P03979 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV3P03979 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV3P03979 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV3P03979 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV3P03979 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.27■□□□□ 0.2
TRGV3P03979 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRGV3P03979 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV3P03979 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV3P03979 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV3P03979 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.27■□□□□ 0.2
TRGV3P03979 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.27■□□□□ 0.2
TRGV3P03979 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.27■□□□□ 0.2
TRGV3P03979 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRGV3P03979 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.27■□□□□ 0.2
TRGV3P03979 SLC7A5P1-201ENST00000568957 537 ntBASIC16.27■□□□□ 0.2
TRGV3P03979 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRGV3P03979 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.27■□□□□ 0.2
TRGV3P03979 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.27■□□□□ 0.2
TRGV3P03979 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TRGV3P03979 IKBKGP1-201ENST00000612193 1073 ntBASIC16.27■□□□□ 0.2
TRGV3P03979 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.27■□□□□ 0.2
TRGV3P03979 BID-214ENST00000617586 542 ntTSL 5 BASIC16.27■□□□□ 0.2
TRGV3P03979 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.27■□□□□ 0.2
TRGV3P03979 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV3P03979 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.27■□□□□ 0.2
TRGV3P03979 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRGV3P03979 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRGV3P03979 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRGV3P03979 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV3P03979 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV3P03979 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV3P03979 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV3P03979 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV3P03979 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV3P03979 FEM1AP4-201ENST00000443167 1987 ntBASIC16.26■□□□□ 0.19
TRGV3P03979 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV3P03979 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRGV3P03979 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV3P03979 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
TRGV3P03979 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV3P03979 AC006015.1-201ENST00000429970 570 ntBASIC16.26■□□□□ 0.19
TRGV3P03979 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.26■□□□□ 0.19
TRGV3P03979 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.26■□□□□ 0.19
TRGV3P03979 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.26■□□□□ 0.19
TRGV3P03979 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.26■□□□□ 0.19
TRGV3P03979 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV3P03979 AC092666.2-201ENST00000613287 246 ntBASIC16.26■□□□□ 0.19
TRGV3P03979 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRGV3P03979 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.26■□□□□ 0.19
TRGV3P03979 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRGV3P03979 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV3P03979 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.26■□□□□ 0.19
TRGV3P03979 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms