Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LINC00969-229ENST00000596584 863 ntTSL 5 BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 AL137798.3-201ENST00000639399 166 ntBASIC10.55□□□□□ -0.72
LMO3Q8TAP4 APOBEC3G-201ENST00000407997 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 RNF185-203ENST00000426256 3315 ntTSL 2 BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 ERVMER61-1-201ENST00000429725 2393 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 CXorf57-202ENST00000372548 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 LINC01998-201ENST00000464673 1967 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 ZSCAN26-207ENST00000623276 1998 ntAPPRIS P2 TSL 3 BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 SYT1-202ENST00000393240 3095 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 PRAMEF17-201ENST00000376098 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 CD200-201ENST00000315711 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 ZNF682-203ENST00000397165 3245 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 ADGRG1-201ENST00000388813 3925 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 CSF2RB-201ENST00000262825 4087 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 RBM23-204ENST00000399922 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 STAU1-207ENST00000371856 3684 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 TTLL5-221ENST00000557636 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LMO3Q8TAP4 FANCA-230ENST00000568369 4601 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 DSN1-202ENST00000373740 1922 ntAPPRIS ALT2 TSL 3 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AC020604.1-201ENST00000622979 1909 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 TMEM246-201ENST00000374847 4223 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 HSFY1-204ENST00000382856 1374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 TOM1L1-210ENST00000572158 1521 ntAPPRIS ALT1 TSL 2 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 CC2D2A-203ENST00000438599 1673 ntTSL 5 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 TATDN2-203ENST00000448281 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 NCF2-203ENST00000413720 2276 ntTSL 2 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 LINC01460-201ENST00000379677 2860 ntTSL 2 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 IPO5P1-201ENST00000593576 2887 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 ST5-213ENST00000526757 3019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 GRB2-205ENST00000392564 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AC040162.3-201ENST00000572067 3907 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 LGALS14-201ENST00000360675 773 ntAPPRIS P3 TSL 3 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 VPS45-202ENST00000369130 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 FGGY-202ENST00000371210 1041 ntTSL 2 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 TRBV6-4-201ENST00000390360 365 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 STT3A-201ENST00000392708 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AC007362.1-208ENST00000423425 553 ntTSL 4 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AC007238.1-201ENST00000434096 1741 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AL358790.1-203ENST00000440461 579 ntTSL 5 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 SEPHS1P6-201ENST00000443084 1179 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 RPL34P18-201ENST00000466433 354 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 RN7SL762P-201ENST00000469864 289 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 RN7SL361P-201ENST00000470785 298 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 COX17-203ENST00000484810 471 ntTSL 2 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AC117482.1-201ENST00000490933 911 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AP002026.1-203ENST00000506160 524 ntTSL 4 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AC006160.1-201ENST00000511010 750 ntTSL 3 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 TTC1-205ENST00000522793 1432 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 VAMP1-204ENST00000535180 747 ntTSL 3 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AC025030.1-201ENST00000548007 573 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AC027088.2-201ENST00000559870 916 ntTSL 3 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AC129492.4-201ENST00000581248 465 ntTSL 2 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 BOD1P1-201ENST00000584421 436 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AC091393.1-201ENST00000605088 598 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AC006058.2-201ENST00000605537 548 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AC013400.1-201ENST00000607190 545 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 LINC02338-201ENST00000615202 2753 ntTSL 2 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 uc_338.24-201ENST00000617802 182 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 BISPR-209ENST00000635176 1041 ntTSL 2 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AC005906.2-214ENST00000640128 1235 ntTSL 5 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 CYP2B7P-203ENST00000599198 2956 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 PKD2L2-201ENST00000290431 2202 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 PLEKHB2-201ENST00000234115 4208 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 ZNF507-202ENST00000355898 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 TTTY14-201ENST00000324446 1495 ntTSL 2 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 ZNF396-204ENST00000586687 1320 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 MUSK-201ENST00000189978 2408 ntTSL 5 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 MUSK-204ENST00000374440 2408 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 PHF8-204ENST00000357988 6024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 RUNX1T1-227ENST00000520724 2103 ntTSL 2 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 BDKRB2-203ENST00000554311 4040 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 SLC39A9-201ENST00000031146 5192 ntTSL 5 BASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AC080128.2-201ENST00000641520 11863 ntBASIC10.54□□□□□ -0.72
LMO3Q8TAP4 AL359752.1-201ENST00000566949 1359 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 CEP70-210ENST00000481834 2037 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 SVILP1-201ENST00000422642 2676 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 KDM4C-201ENST00000381306 4601 ntTSL 2 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 M1AP-209ENST00000536235 2531 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 MAPK10-368ENST00000641911 2238 ntAPPRIS P2 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 SNRNP40-201ENST00000263694 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 CCDC144CP-202ENST00000433419 5227 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 CDHR2-201ENST00000261944 4068 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 LIPT1-202ENST00000393473 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 SPIN3-218ENST00000639007 4277 ntAPPRIS P1 TSL 4 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC005776.2-201ENST00000609708 1769 ntTSL 5 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 SAT2-201ENST00000269298 946 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 RPL21-201ENST00000272274 616 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 RPSA-201ENST00000301821 1171 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 OR2T29-201ENST00000328570 1014 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 TAL2-201ENST00000334077 656 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 ZC3H7A-201ENST00000355758 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 CT83-201ENST00000371894 548 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 RNA5SP377-201ENST00000390852 112 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms