RNA–Protein interactions for RNA: ENST00000376098.4

PRAMEF17-201, Transcript of PRAME family member 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF17, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17-201ENST00000376098 NISCHQ9Y2I1 1504 aa23.47■■□□□ 1.35
PRAMEF17-201ENST00000376098 AEBP2Q6ZN18 517 aaPredicted RBP22.84■■□□□ 1.25
PRAMEF17-201ENST00000376098 CHIC1Q5VXU3 224 aa22.83■■□□□ 1.25
PRAMEF17-201ENST00000376098 CCDC180Q9P1Z9 1646 aa20.81■□□□□ 0.92
PRAMEF17-201ENST00000376098 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
PRAMEF17-201ENST00000376098 ABCC9O60706 1549 aa20.09■□□□□ 0.81
PRAMEF17-201ENST00000376098 ZCCHC6Q5VYS8 1495 aaKnown RBP19.59■□□□□ 0.73
PRAMEF17-201ENST00000376098 DCAF8L2P0C7V8 631 aa19.53■□□□□ 0.72
PRAMEF17-201ENST00000376098 NACADO15069 1562 aa19.48■□□□□ 0.71
PRAMEF17-201ENST00000376098 RB1CC1Q8TDY2 1594 aa19.45■□□□□ 0.7
PRAMEF17-201ENST00000376098 DCAF1Q9Y4B6 1507 aa19.42■□□□□ 0.7
PRAMEF17-201ENST00000376098 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
PRAMEF17-201ENST00000376098 UNC13AQ9UPW8 1703 aa19.13■□□□□ 0.65
PRAMEF17-201ENST00000376098 SENP3Q9H4L4 574 aaPredicted RBP19.12■□□□□ 0.65
PRAMEF17-201ENST00000376098 SCRIBQ14160 1630 aa19■□□□□ 0.63
PRAMEF17-201ENST00000376098 BICRAQ9NZM4 1560 aa18.86■□□□□ 0.61
PRAMEF17-201ENST00000376098 PABPN1Q86U42 306 aaKnown RBP eCLIP18.81■□□□□ 0.6
PRAMEF17-201ENST00000376098 PLPPR3Q6T4P5 718 aa18.76■□□□□ 0.59
PRAMEF17-201ENST00000376098 SHROOM4Q9ULL8 1493 aa18.7■□□□□ 0.58
PRAMEF17-201ENST00000376098 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
PRAMEF17-201ENST00000376098 CECR2Q9BXF3 1484 aa18.26■□□□□ 0.51
PRAMEF17-201ENST00000376098 CC2D2AQ9P2K1 1620 aa18.22■□□□□ 0.51
PRAMEF17-201ENST00000376098 DNAJC5BQ9UF47 199 aa18.21■□□□□ 0.51
PRAMEF17-201ENST00000376098 SMARCA4P51532 1647 aa18.19■□□□□ 0.5
PRAMEF17-201ENST00000376098 BAZ1AQ9NRL2 1556 aaPredicted RBP18.18■□□□□ 0.5
PRAMEF17-201ENST00000376098 MROH2BQ7Z745 1585 aa18.11■□□□□ 0.49
PRAMEF17-201ENST00000376098 SMARCA2P51531 1590 aa18■□□□□ 0.47
PRAMEF17-201ENST00000376098 ATAD2BQ9ULI0 1458 aa17.99■□□□□ 0.47
PRAMEF17-201ENST00000376098 PEG3Q9GZU2 1588 aa17.98■□□□□ 0.47
PRAMEF17-201ENST00000376098 WIZO95785 1651 aa17.97■□□□□ 0.47
PRAMEF17-201ENST00000376098 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.46
PRAMEF17-201ENST00000376098 NCAPD3P42695 1498 aa17.93■□□□□ 0.46
PRAMEF17-201ENST00000376098 HMGXB3Q12766 1538 aa17.89■□□□□ 0.45
PRAMEF17-201ENST00000376098 BAZ1BQ9UIG0 1483 aaKnown RBP17.86■□□□□ 0.45
PRAMEF17-201ENST00000376098 FOXD1Q16676 465 aa17.77■□□□□ 0.44
PRAMEF17-201ENST00000376098 TOP2AP11388 1531 aaKnown RBP17.75■□□□□ 0.43
PRAMEF17-201ENST00000376098 SUPT5HO00267 1087 aaKnown RBP17.7■□□□□ 0.42
PRAMEF17-201ENST00000376098 ADRA2BP18089 450 aa17.7■□□□□ 0.42
PRAMEF17-201ENST00000376098 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
PRAMEF17-201ENST00000376098 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
PRAMEF17-201ENST00000376098 NESP48681 1621 aa17.47■□□□□ 0.39
PRAMEF17-201ENST00000376098 LAMC3Q9Y6N6 1575 aa17.46■□□□□ 0.39
PRAMEF17-201ENST00000376098 CADPSQ9ULU8 1353 aa17.43■□□□□ 0.38
PRAMEF17-201ENST00000376098 PRDM2Q13029 1718 aa17.41■□□□□ 0.38
PRAMEF17-201ENST00000376098 CFTRP13569 1480 aa17.38■□□□□ 0.37
PRAMEF17-201ENST00000376098 KIF21AQ7Z4S6 1674 aa17.34■□□□□ 0.37
PRAMEF17-201ENST00000376098 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
PRAMEF17-201ENST00000376098 ERCC6Q03468 1493 aa17.3■□□□□ 0.36
PRAMEF17-201ENST00000376098 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
PRAMEF17-201ENST00000376098 CEP164Q9UPV0 1460 aa17.2■□□□□ 0.34
PRAMEF17-201ENST00000376098 THOC2Q8NI27 1593 aaKnown RBP17.17■□□□□ 0.34
PRAMEF17-201ENST00000376098 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
PRAMEF17-201ENST00000376098 WDR62O43379 1518 aa17.07■□□□□ 0.32
PRAMEF17-201ENST00000376098 URB2Q14146 1524 aaKnown RBP17.06■□□□□ 0.32
PRAMEF17-201ENST00000376098 KCNA4P22459 653 aa17.04■□□□□ 0.32
PRAMEF17-201ENST00000376098 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.32
PRAMEF17-201ENST00000376098 CUX2O14529 1486 aa17.02■□□□□ 0.31
PRAMEF17-201ENST00000376098 ABCC8Q09428 1581 aa17.01■□□□□ 0.31
PRAMEF17-201ENST00000376098 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
PRAMEF17-201ENST00000376098 CUX1P39880 1505 aa16.97■□□□□ 0.31
PRAMEF17-201ENST00000376098 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
PRAMEF17-201ENST00000376098 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
PRAMEF17-201ENST00000376098 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
PRAMEF17-201ENST00000376098 TOP2BQ02880 1626 aa16.9■□□□□ 0.3
PRAMEF17-201ENST00000376098 FGD5Q6ZNL6 1462 aa16.87■□□□□ 0.29
PRAMEF17-201ENST00000376098 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
PRAMEF17-201ENST00000376098 PIAS4Q8N2W9 510 aaPredicted RBP16.84■□□□□ 0.29
PRAMEF17-201ENST00000376098 TARBP1Q13395 1621 aaKnown RBP16.83■□□□□ 0.28
PRAMEF17-201ENST00000376098 IFT140Q96RY7 1462 aa16.82■□□□□ 0.28
PRAMEF17-201ENST00000376098 SOGA1O94964 1423 aa16.8■□□□□ 0.28
PRAMEF17-201ENST00000376098 RAD54L2Q9Y4B4 1467 aa16.8■□□□□ 0.28
PRAMEF17-201ENST00000376098 WDR97A6NE52 1622 aa16.77■□□□□ 0.28
PRAMEF17-201ENST00000376098 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
PRAMEF17-201ENST00000376098 EIF4G3O43432 1585 aaKnown RBP16.71■□□□□ 0.27
PRAMEF17-201ENST00000376098 ABCA10Q8WWZ4 1543 aa16.7■□□□□ 0.26
PRAMEF17-201ENST00000376098 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
PRAMEF17-201ENST00000376098 AQRO60306 1485 aaKnown RBP eCLIP16.68■□□□□ 0.26
PRAMEF17-201ENST00000376098 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
PRAMEF17-201ENST00000376098 PPP4R3CPQ6ZMV5 832 aa16.66■□□□□ 0.26
PRAMEF17-201ENST00000376098 PBRM1Q86U86 1689 aa16.66■□□□□ 0.26
PRAMEF17-201ENST00000376098 ABCA5Q8WWZ7 1642 aa16.65■□□□□ 0.26
PRAMEF17-201ENST00000376098 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
PRAMEF17-201ENST00000376098 DNAJC5Q9H3Z4 198 aa16.6■□□□□ 0.25
PRAMEF17-201ENST00000376098 EHMT2Q96KQ7 1210 aa16.57■□□□□ 0.24
PRAMEF17-201ENST00000376098 GRIN2BQ13224 1484 aa16.57■□□□□ 0.24
PRAMEF17-201ENST00000376098 KIF27Q86VH2 1401 aa16.56■□□□□ 0.24
PRAMEF17-201ENST00000376098 SNAPC4Q5SXM2 1469 aa16.53■□□□□ 0.24
PRAMEF17-201ENST00000376098 ERICH3Q5RHP9 1530 aa16.52■□□□□ 0.24
PRAMEF17-201ENST00000376098 CHD1O14646 1710 aa16.52■□□□□ 0.24
PRAMEF17-201ENST00000376098 RUSC2Q8N2Y8 1516 aa16.51■□□□□ 0.23
PRAMEF17-201ENST00000376098 MAGI1Q96QZ7 1491 aaPredicted RBP16.51■□□□□ 0.23
PRAMEF17-201ENST00000376098 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
PRAMEF17-201ENST00000376098 IGF1RP08069 1367 aa16.45■□□□□ 0.22
PRAMEF17-201ENST00000376098 CUL7Q14999 1698 aa16.45■□□□□ 0.22
PRAMEF17-201ENST00000376098 SYNJ2O15056 1496 aa16.44■□□□□ 0.22
PRAMEF17-201ENST00000376098 FBLN2P98095 1184 aa16.43■□□□□ 0.22
PRAMEF17-201ENST00000376098 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
PRAMEF17-201ENST00000376098 CHMP7Q8WUX9 453 aaPredicted RBP16.42■□□□□ 0.22
PRAMEF17-201ENST00000376098 EEA1Q15075 1411 aa16.39■□□□□ 0.21
PRAMEF17-201ENST00000376098 CARMIL1Q5VZK9 1371 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms