RNA–Protein interactions for RNA: ENST00000261944.9

CDHR2-201, Transcript of cadherin related family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR2, Length 4,068 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR2-201ENST00000261944 NISCHQ9Y2I1 1504 aa21.49■■□□□ 1.03
CDHR2-201ENST00000261944 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
CDHR2-201ENST00000261944 ABCC9O60706 1549 aa18.89■□□□□ 0.61
CDHR2-201ENST00000261944 SHROOM4Q9ULL8 1493 aa18.69■□□□□ 0.58
CDHR2-201ENST00000261944 CCDC180Q9P1Z9 1646 aa18.28■□□□□ 0.52
CDHR2-201ENST00000261944 PABPN1Q86U42 306 aaKnown RBP eCLIP18.2■□□□□ 0.51e-6■□□□□ 11.2
CDHR2-201ENST00000261944 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
CDHR2-201ENST00000261944 ZCCHC6Q5VYS8 1495 aaKnown RBP17.81■□□□□ 0.44
CDHR2-201ENST00000261944 RB1CC1Q8TDY2 1594 aa17.65■□□□□ 0.42
CDHR2-201ENST00000261944 SCRIBQ14160 1630 aa17.63■□□□□ 0.41
CDHR2-201ENST00000261944 NACADO15069 1562 aa17.55■□□□□ 0.4
CDHR2-201ENST00000261944 DCAF1Q9Y4B6 1507 aa17.25■□□□□ 0.35
CDHR2-201ENST00000261944 EHMT2Q96KQ7 1210 aa17.13■□□□□ 0.33
CDHR2-201ENST00000261944 MYO15BQ96JP2 1530 aa17.09■□□□□ 0.33
CDHR2-201ENST00000261944 CECR2Q9BXF3 1484 aa17■□□□□ 0.31
CDHR2-201ENST00000261944 FAM9AQ8IZU1 332 aaPredicted RBP16.95■□□□□ 0.3
CDHR2-201ENST00000261944 DNAJC5BQ9UF47 199 aa16.88■□□□□ 0.29
CDHR2-201ENST00000261944 TRIM41Q8WV44 630 aa16.83■□□□□ 0.28
CDHR2-201ENST00000261944 RSF1Q96T23 1441 aaPredicted RBP16.78■□□□□ 0.28
CDHR2-201ENST00000261944 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
CDHR2-201ENST00000261944 RANGAP1P46060 587 aaPredicted RBP16.7■□□□□ 0.26
CDHR2-201ENST00000261944 MROH2BQ7Z745 1585 aa16.7■□□□□ 0.26
CDHR2-201ENST00000261944 BAZ1AQ9NRL2 1556 aaPredicted RBP16.69■□□□□ 0.26
CDHR2-201ENST00000261944 BICRAQ9NZM4 1560 aa16.67■□□□□ 0.26
CDHR2-201ENST00000261944 EIF4G1Q04637 1599 aaKnown RBP16.58■□□□□ 0.24
CDHR2-201ENST00000261944 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
CDHR2-201ENST00000261944 FBLN2P98095 1184 aa16.51■□□□□ 0.23
CDHR2-201ENST00000261944 UNC13AQ9UPW8 1703 aa16.5■□□□□ 0.23
CDHR2-201ENST00000261944 TTBK1Q5TCY1 1321 aaPredicted RBP16.48■□□□□ 0.23
CDHR2-201ENST00000261944 SMARCA2P51531 1590 aa16.46■□□□□ 0.23
CDHR2-201ENST00000261944 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
CDHR2-201ENST00000261944 SMARCA4P51532 1647 aa16.46■□□□□ 0.22
CDHR2-201ENST00000261944 CHIC1Q5VXU3 224 aa16.45■□□□□ 0.22
CDHR2-201ENST00000261944 WIZO95785 1651 aa16.45■□□□□ 0.22
CDHR2-201ENST00000261944 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
CDHR2-201ENST00000261944 UBTFP17480 764 aaKnown RBP16.43■□□□□ 0.22
CDHR2-201ENST00000261944 ATP1B4Q9UN42 357 aaPredicted RBP16.35■□□□□ 0.21
CDHR2-201ENST00000261944 CCDC88BA6NC98 1476 aa16.32■□□□□ 0.2
CDHR2-201ENST00000261944 NCAPD3P42695 1498 aa16.32■□□□□ 0.2
CDHR2-201ENST00000261944 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.19
CDHR2-201ENST00000261944 PDS5BQ9NTI5 1447 aa16.21■□□□□ 0.19
CDHR2-201ENST00000261944 LOC105371045A0A1W2PR82 267 aa16.21■□□□□ 0.19
CDHR2-201ENST00000261944 TOP2AP11388 1531 aaKnown RBP16.2■□□□□ 0.18
CDHR2-201ENST00000261944 NESP48681 1621 aa16.2■□□□□ 0.18
CDHR2-201ENST00000261944 APLP2Q06481 763 aa16.11■□□□□ 0.17
CDHR2-201ENST00000261944 CHMP7Q8WUX9 453 aaPredicted RBP16.09■□□□□ 0.17
CDHR2-201ENST00000261944 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.17
CDHR2-201ENST00000261944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.09■□□□□ 0.17
CDHR2-201ENST00000261944 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
CDHR2-201ENST00000261944 FANCD2Q9BXW9 1451 aa16.06■□□□□ 0.16
CDHR2-201ENST00000261944 P3H3Q8IVL6 736 aa16.04■□□□□ 0.16
CDHR2-201ENST00000261944 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
CDHR2-201ENST00000261944 CEP164Q9UPV0 1460 aa16.02■□□□□ 0.15
CDHR2-201ENST00000261944 TDRD9Q8NDG6 1382 aaKnown RBP16.02■□□□□ 0.15
CDHR2-201ENST00000261944 HMGXB3Q12766 1538 aa16.01■□□□□ 0.15
CDHR2-201ENST00000261944 PCGF6Q9BYE7 350 aa16■□□□□ 0.15
CDHR2-201ENST00000261944 ARID3CA6NKF2 412 aa15.99■□□□□ 0.15
CDHR2-201ENST00000261944 PPARGC1BQ86YN6 1023 aaKnown RBP15.99■□□□□ 0.15
CDHR2-201ENST00000261944 ABCC8Q09428 1581 aa15.98■□□□□ 0.15
CDHR2-201ENST00000261944 SOGA1O94964 1423 aa15.93■□□□□ 0.14
CDHR2-201ENST00000261944 CFTRP13569 1480 aa15.9■□□□□ 0.14
CDHR2-201ENST00000261944 CUX2O14529 1486 aa15.87■□□□□ 0.13
CDHR2-201ENST00000261944 PEG3Q9GZU2 1588 aa15.83■□□□□ 0.12
CDHR2-201ENST00000261944 KIF27Q86VH2 1401 aa15.81■□□□□ 0.12
CDHR2-201ENST00000261944 RAD54L2Q9Y4B4 1467 aa15.8■□□□□ 0.12
CDHR2-201ENST00000261944 AQRO60306 1485 aaKnown RBP eCLIP15.75■□□□□ 0.11
CDHR2-201ENST00000261944 MRC2Q9UBG0 1479 aa15.74■□□□□ 0.11
CDHR2-201ENST00000261944 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
CDHR2-201ENST00000261944 MYT1LQ9UL68 1186 aa15.72■□□□□ 0.11
CDHR2-201ENST00000261944 LAMC3Q9Y6N6 1575 aa15.72■□□□□ 0.11
CDHR2-201ENST00000261944 CARMIL1Q5VZK9 1371 aa15.7■□□□□ 0.1
CDHR2-201ENST00000261944 NPM1P06748 294 aaKnown RBP eCLIP15.67■□□□□ 0.1
CDHR2-201ENST00000261944 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
CDHR2-201ENST00000261944 TOPBP1Q92547 1522 aa15.66■□□□□ 0.1
CDHR2-201ENST00000261944 ITGAEP38570 1179 aa15.64■□□□□ 0.09
CDHR2-201ENST00000261944 RUSC2Q8N2Y8 1516 aa15.62■□□□□ 0.09
CDHR2-201ENST00000261944 POLA1P09884 1462 aaPredicted RBP15.6■□□□□ 0.09
CDHR2-201ENST00000261944 CYB5RLQ6IPT4 315 aa15.6■□□□□ 0.09
CDHR2-201ENST00000261944 URB2Q14146 1524 aaKnown RBP15.59■□□□□ 0.09
CDHR2-201ENST00000261944 GAPVD1Q14C86 1478 aa15.58■□□□□ 0.08
CDHR2-201ENST00000261944 CUX1P39880 1505 aa15.58■□□□□ 0.08
CDHR2-201ENST00000261944 KCNH8Q96L42 1107 aa15.56■□□□□ 0.08
CDHR2-201ENST00000261944 TRHP20396 242 aaPredicted RBP15.54■□□□□ 0.08
CDHR2-201ENST00000261944 PELP1Q8IZL8 1130 aaKnown RBP15.54■□□□□ 0.08
CDHR2-201ENST00000261944 JPH4Q96JJ6 628 aa15.53■□□□□ 0.08
CDHR2-201ENST00000261944 SYNJ1O43426 1573 aa15.52■□□□□ 0.08
CDHR2-201ENST00000261944 ZNF608Q9ULD9 1512 aaPredicted RBP15.52■□□□□ 0.08
CDHR2-201ENST00000261944 EEA1Q15075 1411 aa15.51■□□□□ 0.07
CDHR2-201ENST00000261944 IFT140Q96RY7 1462 aa15.51■□□□□ 0.07
CDHR2-201ENST00000261944 IGF1RP08069 1367 aa15.51■□□□□ 0.07
CDHR2-201ENST00000261944 ZNF777Q9ULD5 760 aaPredicted RBP15.48■□□□□ 0.07
CDHR2-201ENST00000261944 DNMBPQ6XZF7 1577 aa15.48■□□□□ 0.07
CDHR2-201ENST00000261944 GOLGA3Q08378 1498 aa15.44■□□□□ 0.06
CDHR2-201ENST00000261944 FAM50AQ14320 339 aaKnown RBP15.44■□□□□ 0.06
CDHR2-201ENST00000261944 GRIN2BQ13224 1484 aa15.44■□□□□ 0.06
CDHR2-201ENST00000261944 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
CDHR2-201ENST00000261944 CDK11AQ9UQ88 783 aaPredicted RBP15.43■□□□□ 0.06
CDHR2-201ENST00000261944 CLIP1P30622 1438 aa15.43■□□□□ 0.06
CDHR2-201ENST00000261944 CCER1Q8TC90 406 aaPredicted RBP15.41■□□□□ 0.06
CDHR2-201ENST00000261944 SNAPC4Q5SXM2 1469 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms