RNA–Protein interactions for RNA: ENST00000572067.1

AC040162.3-201, humanhuman

BASIC

Gene AC040162.3, Length 3,907 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040162.3-201ENST00000572067 NISCHQ9Y2I1 1504 aa18.93■□□□□ 0.62
AC040162.3-201ENST00000572067 DCAF8L2P0C7V8 631 aa17.6■□□□□ 0.41
AC040162.3-201ENST00000572067 SHROOM4Q9ULL8 1493 aa17.41■□□□□ 0.38
AC040162.3-201ENST00000572067 SUPT5HO00267 1087 aaKnown RBP17.25■□□□□ 0.35
AC040162.3-201ENST00000572067 PELP1Q8IZL8 1130 aaKnown RBP16.84■□□□□ 0.29
AC040162.3-201ENST00000572067 HRCP23327 699 aa16.82■□□□□ 0.28
AC040162.3-201ENST00000572067 EHMT2Q96KQ7 1210 aa16.7■□□□□ 0.26
AC040162.3-201ENST00000572067 MYT1Q01538 1121 aa16.41■□□□□ 0.22
AC040162.3-201ENST00000572067 PCGF6Q9BYE7 350 aa16.33■□□□□ 0.2
AC040162.3-201ENST00000572067 ZEB1P37275 1124 aaPredicted RBP16.26■□□□□ 0.19
AC040162.3-201ENST00000572067 FAM9AQ8IZU1 332 aaPredicted RBP16.23■□□□□ 0.19
AC040162.3-201ENST00000572067 DCAF1Q9Y4B6 1507 aa16.2■□□□□ 0.18
AC040162.3-201ENST00000572067 CHIC1Q5VXU3 224 aa16.18■□□□□ 0.18
AC040162.3-201ENST00000572067 ABCC9O60706 1549 aa16.16■□□□□ 0.18
AC040162.3-201ENST00000572067 CCDC180Q9P1Z9 1646 aa16.07■□□□□ 0.16
AC040162.3-201ENST00000572067 LOC105371045A0A1W2PR82 267 aa16.06■□□□□ 0.16
AC040162.3-201ENST00000572067 TRIM26Q12899 539 aaPredicted RBP16.05■□□□□ 0.16
AC040162.3-201ENST00000572067 PPARGC1BQ86YN6 1023 aaKnown RBP16.05■□□□□ 0.16
AC040162.3-201ENST00000572067 TTBK1Q5TCY1 1321 aaPredicted RBP16.02■□□□□ 0.16
AC040162.3-201ENST00000572067 MYO15BQ96JP2 1530 aa16■□□□□ 0.15
AC040162.3-201ENST00000572067 ZCCHC6Q5VYS8 1495 aaKnown RBP15.92■□□□□ 0.14
AC040162.3-201ENST00000572067 CENPBP07199 599 aaPredicted RBP15.72■□□□□ 0.11
AC040162.3-201ENST00000572067 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
AC040162.3-201ENST00000572067 RANGAP1P46060 587 aaPredicted RBP15.67■□□□□ 0.1
AC040162.3-201ENST00000572067 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
AC040162.3-201ENST00000572067 ACIN1Q9UKV3 1341 aaKnown RBP15.58■□□□□ 0.09
AC040162.3-201ENST00000572067 PABPN1Q86U42 306 aaKnown RBP eCLIP15.48■□□□□ 0.079e-10■■□□□ 14.1
AC040162.3-201ENST00000572067 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
AC040162.3-201ENST00000572067 GTF3C3Q9Y5Q9 886 aa15.35■□□□□ 0.05
AC040162.3-201ENST00000572067 CCER1Q8TC90 406 aaPredicted RBP15.32■□□□□ 0.04
AC040162.3-201ENST00000572067 NEUROD1Q13562 356 aa15.31■□□□□ 0.04
AC040162.3-201ENST00000572067 DIEXFQ68CQ4 756 aaKnown RBP15.31■□□□□ 0.04
AC040162.3-201ENST00000572067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.21■□□□□ 0.03
AC040162.3-201ENST00000572067 UBTFP17480 764 aaKnown RBP15.21■□□□□ 0.03
AC040162.3-201ENST00000572067 CLSPNQ9HAW4 1339 aa15.2■□□□□ 0.02
AC040162.3-201ENST00000572067 ZNF316A6NFI3 1004 aaPredicted RBP15.07■□□□□ 0
AC040162.3-201ENST00000572067 RB1CC1Q8TDY2 1594 aa15.06■□□□□ 0
AC040162.3-201ENST00000572067 NACADO15069 1562 aa15.05■□□□□ -0
AC040162.3-201ENST00000572067 CECR2Q9BXF3 1484 aa15.05■□□□□ -0
AC040162.3-201ENST00000572067 YTHDC1Q96MU7 727 aaKnown RBP15.03■□□□□ -0
AC040162.3-201ENST00000572067 HNRNPUL2Q1KMD3 747 aaKnown RBP15□□□□□ -0.01
AC040162.3-201ENST00000572067 RSF1Q96T23 1441 aaPredicted RBP14.99□□□□□ -0.01
AC040162.3-201ENST00000572067 ATP1B4Q9UN42 357 aaPredicted RBP14.94□□□□□ -0.02
AC040162.3-201ENST00000572067 ITGAEP38570 1179 aa14.92□□□□□ -0.02
AC040162.3-201ENST00000572067 WRNQ14191 1432 aaPredicted RBP eCLIP14.88□□□□□ -0.03
AC040162.3-201ENST00000572067 APLP2Q06481 763 aa14.88□□□□□ -0.03
AC040162.3-201ENST00000572067 MROH2BQ7Z745 1585 aa14.83□□□□□ -0.03
AC040162.3-201ENST00000572067 ANP32EQ9BTT0 268 aa14.78□□□□□ -0.04
AC040162.3-201ENST00000572067 EEA1Q15075 1411 aa14.73□□□□□ -0.05
AC040162.3-201ENST00000572067 MIER1Q8N108 512 aa14.73□□□□□ -0.05
AC040162.3-201ENST00000572067 WIZO95785 1651 aa14.72□□□□□ -0.05
AC040162.3-201ENST00000572067 UNC13AQ9UPW8 1703 aa14.72□□□□□ -0.05
AC040162.3-201ENST00000572067 TNIKQ9UKE5 1360 aa14.7□□□□□ -0.06
AC040162.3-201ENST00000572067 DNAJC5BQ9UF47 199 aa14.7□□□□□ -0.06
AC040162.3-201ENST00000572067 CEP162Q5TB80 1403 aa14.67□□□□□ -0.06
AC040162.3-201ENST00000572067 BCL11AQ9H165 835 aa14.63□□□□□ -0.07
AC040162.3-201ENST00000572067 SUPT16HQ9Y5B9 1047 aaKnown RBP14.62□□□□□ -0.07
AC040162.3-201ENST00000572067 P3H3Q8IVL6 736 aa14.59□□□□□ -0.07
AC040162.3-201ENST00000572067 CSRNP3Q8WYN3 585 aa14.58□□□□□ -0.08
AC040162.3-201ENST00000572067 BICRAQ9NZM4 1560 aa14.58□□□□□ -0.08
AC040162.3-201ENST00000572067 NEFLP07196 543 aa14.55□□□□□ -0.08
AC040162.3-201ENST00000572067 BAZ1AQ9NRL2 1556 aaPredicted RBP14.54□□□□□ -0.08
AC040162.3-201ENST00000572067 CNGB1Q14028 1251 aaPredicted RBP14.54□□□□□ -0.08
AC040162.3-201ENST00000572067 MYT1LQ9UL68 1186 aa14.53□□□□□ -0.08
AC040162.3-201ENST00000572067 TSHZ2Q9NRE2 1034 aa14.53□□□□□ -0.08
AC040162.3-201ENST00000572067 GOLGA3Q08378 1498 aa14.53□□□□□ -0.08
AC040162.3-201ENST00000572067 ARID3CA6NKF2 412 aa14.49□□□□□ -0.09
AC040162.3-201ENST00000572067 SMARCA4P51532 1647 aa14.47□□□□□ -0.09
AC040162.3-201ENST00000572067 SOGA1O94964 1423 aa14.45□□□□□ -0.1
AC040162.3-201ENST00000572067 ERICH6Q7L0X2 663 aa14.45□□□□□ -0.1
AC040162.3-201ENST00000572067 CCDC88BA6NC98 1476 aa14.44□□□□□ -0.1
AC040162.3-201ENST00000572067 ABCC8Q09428 1581 aa14.42□□□□□ -0.1
AC040162.3-201ENST00000572067 EIF4G1Q04637 1599 aaKnown RBP14.4□□□□□ -0.1
AC040162.3-201ENST00000572067 CEP164Q9UPV0 1460 aa14.39□□□□□ -0.11
AC040162.3-201ENST00000572067 HIRIP3Q9BW71 556 aaPredicted RBP14.37□□□□□ -0.11
AC040162.3-201ENST00000572067 FAM50AQ14320 339 aaKnown RBP14.37□□□□□ -0.11
AC040162.3-201ENST00000572067 VPS8Q8N3P4 1428 aa14.35□□□□□ -0.11
AC040162.3-201ENST00000572067 CLIP1P30622 1438 aa14.35□□□□□ -0.11
AC040162.3-201ENST00000572067 BAZ1BQ9UIG0 1483 aaKnown RBP14.35□□□□□ -0.11
AC040162.3-201ENST00000572067 TOP2AP11388 1531 aaKnown RBP14.35□□□□□ -0.11
AC040162.3-201ENST00000572067 RUSC2Q8N2Y8 1516 aa14.33□□□□□ -0.11
AC040162.3-201ENST00000572067 ATAD2BQ9ULI0 1458 aa14.33□□□□□ -0.12
AC040162.3-201ENST00000572067 PRKCSHP14314 528 aaPredicted RBP14.32□□□□□ -0.12
AC040162.3-201ENST00000572067 FKBP8Q14318 412 aa14.29□□□□□ -0.12
AC040162.3-201ENST00000572067 KIF21BO75037 1637 aa14.28□□□□□ -0.12
AC040162.3-201ENST00000572067 BCANQ96GW7 911 aa14.27□□□□□ -0.12
AC040162.3-201ENST00000572067 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
AC040162.3-201ENST00000572067 RBM19Q9Y4C8 960 aaKnown RBP14.25□□□□□ -0.13
AC040162.3-201ENST00000572067 DHX57Q6P158 1386 aaKnown RBP14.25□□□□□ -0.13
AC040162.3-201ENST00000572067 CDK11AQ9UQ88 783 aaPredicted RBP14.23□□□□□ -0.13
AC040162.3-201ENST00000572067 POLR3GLQ9BT43 218 aa14.21□□□□□ -0.13
AC040162.3-201ENST00000572067 FANCIQ9NVI1 1328 aa14.2□□□□□ -0.14
AC040162.3-201ENST00000572067 CCER2I3L3R5 266 aa14.19□□□□□ -0.14
AC040162.3-201ENST00000572067 SENP3-EIF4A1A0A087X0R7 540 aa14.18□□□□□ -0.14
AC040162.3-201ENST00000572067 ERICH6BQ5W0A0 696 aa14.17□□□□□ -0.14
AC040162.3-201ENST00000572067 ANP32CO43423 234 aa14.16□□□□□ -0.14
AC040162.3-201ENST00000572067 KANK4Q5T7N3 995 aaPredicted RBP14.16□□□□□ -0.14
AC040162.3-201ENST00000572067 TIMELESSQ9UNS1 1208 aa14.16□□□□□ -0.14
AC040162.3-201ENST00000572067 CC2D2AQ9P2K1 1620 aa14.15□□□□□ -0.14
AC040162.3-201ENST00000572067 CUX2O14529 1486 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms