RNA–Protein interactions for RNA: ENST00000315711.12

CD200-201, Transcript of CD200 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD200, Length 2,129 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD200-201ENST00000315711 NISCHQ9Y2I1 1504 aa20.85■□□□□ 0.93
CD200-201ENST00000315711 CCDC180Q9P1Z9 1646 aa17.91■□□□□ 0.46
CD200-201ENST00000315711 ZCCHC6Q5VYS8 1495 aaKnown RBP17.62■□□□□ 0.41
CD200-201ENST00000315711 SHROOM4Q9ULL8 1493 aa17.36■□□□□ 0.37
CD200-201ENST00000315711 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
CD200-201ENST00000315711 DCAF1Q9Y4B6 1507 aa17.22■□□□□ 0.35
CD200-201ENST00000315711 DCAF8L2P0C7V8 631 aa17■□□□□ 0.31
CD200-201ENST00000315711 SUPT5HO00267 1087 aaKnown RBP16.91■□□□□ 0.3
CD200-201ENST00000315711 MYO15BQ96JP2 1530 aa16.83■□□□□ 0.28
CD200-201ENST00000315711 ABCC9O60706 1549 aa16.58■□□□□ 0.25
CD200-201ENST00000315711 SCRIBQ14160 1630 aa16.58■□□□□ 0.24
CD200-201ENST00000315711 NACADO15069 1562 aa16.56■□□□□ 0.24
CD200-201ENST00000315711 CHIC1Q5VXU3 224 aa16.49■□□□□ 0.23
CD200-201ENST00000315711 RSF1Q96T23 1441 aaPredicted RBP16.38■□□□□ 0.21
CD200-201ENST00000315711 RB1CC1Q8TDY2 1594 aa16.29■□□□□ 0.2
CD200-201ENST00000315711 CECR2Q9BXF3 1484 aa16.21■□□□□ 0.19
CD200-201ENST00000315711 MROH2BQ7Z745 1585 aa16.16■□□□□ 0.18
CD200-201ENST00000315711 UNC13AQ9UPW8 1703 aa16.09■□□□□ 0.17
CD200-201ENST00000315711 WIZO95785 1651 aa16.05■□□□□ 0.16
CD200-201ENST00000315711 BAZ1AQ9NRL2 1556 aaPredicted RBP16.02■□□□□ 0.15
CD200-201ENST00000315711 SMARCA4P51532 1647 aa15.93■□□□□ 0.14
CD200-201ENST00000315711 LOC105371045A0A1W2PR82 267 aa15.9■□□□□ 0.14
CD200-201ENST00000315711 BICRAQ9NZM4 1560 aa15.9■□□□□ 0.14
CD200-201ENST00000315711 EIF4G1Q04637 1599 aaKnown RBP15.87■□□□□ 0.13
CD200-201ENST00000315711 TOP2AP11388 1531 aaKnown RBP15.85■□□□□ 0.13
CD200-201ENST00000315711 TRIM41Q8WV44 630 aa15.83■□□□□ 0.13
CD200-201ENST00000315711 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
CD200-201ENST00000315711 CCDC88BA6NC98 1476 aa15.73■□□□□ 0.11
CD200-201ENST00000315711 PEG3Q9GZU2 1588 aa15.71■□□□□ 0.11
CD200-201ENST00000315711 PABPN1Q86U42 306 aaKnown RBP eCLIP15.71■□□□□ 0.11
CD200-201ENST00000315711 PCGF6Q9BYE7 350 aa15.64■□□□□ 0.09
CD200-201ENST00000315711 HRCP23327 699 aa15.61■□□□□ 0.09
CD200-201ENST00000315711 FAM9AQ8IZU1 332 aaPredicted RBP15.59■□□□□ 0.09
CD200-201ENST00000315711 ABCC8Q09428 1581 aa15.57■□□□□ 0.08
CD200-201ENST00000315711 ATAD2BQ9ULI0 1458 aa15.54■□□□□ 0.08
CD200-201ENST00000315711 TRIM26Q12899 539 aaPredicted RBP15.49■□□□□ 0.07
CD200-201ENST00000315711 BAZ1BQ9UIG0 1483 aaKnown RBP15.45■□□□□ 0.06
CD200-201ENST00000315711 SOGA1O94964 1423 aa15.38■□□□□ 0.05
CD200-201ENST00000315711 EHMT2Q96KQ7 1210 aa15.37■□□□□ 0.05
CD200-201ENST00000315711 EEA1Q15075 1411 aa15.36■□□□□ 0.05
CD200-201ENST00000315711 WRNQ14191 1432 aaPredicted RBP eCLIP15.36■□□□□ 0.05
CD200-201ENST00000315711 SYNJ1O43426 1573 aa15.33■□□□□ 0.05
CD200-201ENST00000315711 HMGXB3Q12766 1538 aa15.32■□□□□ 0.04
CD200-201ENST00000315711 RUSC2Q8N2Y8 1516 aa15.32■□□□□ 0.04
CD200-201ENST00000315711 NCAPD3P42695 1498 aa15.31■□□□□ 0.04
CD200-201ENST00000315711 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
CD200-201ENST00000315711 TNIKQ9UKE5 1360 aa15.26■□□□□ 0.03
CD200-201ENST00000315711 CEP162Q5TB80 1403 aa15.22■□□□□ 0.03
CD200-201ENST00000315711 PPARGC1BQ86YN6 1023 aaKnown RBP15.21■□□□□ 0.03
CD200-201ENST00000315711 TOP2BQ02880 1626 aa15.2■□□□□ 0.02
CD200-201ENST00000315711 GOLGA3Q08378 1498 aa15.19■□□□□ 0.02
CD200-201ENST00000315711 KIF21BO75037 1637 aa15.19■□□□□ 0.02
CD200-201ENST00000315711 BIVM-ERCC5R4GMW8 1640 aa15.18■□□□□ 0.02
CD200-201ENST00000315711 CEP164Q9UPV0 1460 aa15.14■□□□□ 0.01
CD200-201ENST00000315711 CFTRP13569 1480 aa15.12■□□□□ 0.01
CD200-201ENST00000315711 UBTFP17480 764 aaKnown RBP15.07■□□□□ 0
CD200-201ENST00000315711 ZEB1P37275 1124 aaPredicted RBP15.07■□□□□ 0
CD200-201ENST00000315711 CUX1P39880 1505 aa15.07■□□□□ 0
CD200-201ENST00000315711 PRDM2Q13029 1718 aa15.06■□□□□ 0
CD200-201ENST00000315711 RAPGEF2Q9Y4G8 1499 aa15.03■□□□□ -0
CD200-201ENST00000315711 PRXQ9BXM0 1461 aa14.98□□□□□ -0.01
CD200-201ENST00000315711 CC2D2AQ9P2K1 1620 aa14.98□□□□□ -0.01
CD200-201ENST00000315711 ERICH3Q5RHP9 1530 aa14.98□□□□□ -0.01
CD200-201ENST00000315711 CLIP1P30622 1438 aa14.98□□□□□ -0.01
CD200-201ENST00000315711 SENP3Q9H4L4 574 aaPredicted RBP14.98□□□□□ -0.01
CD200-201ENST00000315711 CADPSQ9ULU8 1353 aa14.94□□□□□ -0.02
CD200-201ENST00000315711 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
CD200-201ENST00000315711 KIF27Q86VH2 1401 aa14.9□□□□□ -0.02
CD200-201ENST00000315711 TTBK1Q5TCY1 1321 aaPredicted RBP14.83□□□□□ -0.04
CD200-201ENST00000315711 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.83□□□□□ -0.04
CD200-201ENST00000315711 ARAP1Q96P48 1450 aa14.82□□□□□ -0.04
CD200-201ENST00000315711 FGD5Q6ZNL6 1462 aa14.8□□□□□ -0.04
CD200-201ENST00000315711 IGF1RP08069 1367 aa14.78□□□□□ -0.04
CD200-201ENST00000315711 CUX2O14529 1486 aa14.78□□□□□ -0.04
CD200-201ENST00000315711 FANCD2Q9BXW9 1451 aa14.78□□□□□ -0.04
CD200-201ENST00000315711 CCER1Q8TC90 406 aaPredicted RBP14.77□□□□□ -0.05
CD200-201ENST00000315711 DNMBPQ6XZF7 1577 aa14.74□□□□□ -0.05
CD200-201ENST00000315711 ARHGAP35Q9NRY4 1499 aa14.72□□□□□ -0.05
CD200-201ENST00000315711 NESP48681 1621 aa14.71□□□□□ -0.05
CD200-201ENST00000315711 RANGAP1P46060 587 aaPredicted RBP14.71□□□□□ -0.06
CD200-201ENST00000315711 TOPBP1Q92547 1522 aa14.69□□□□□ -0.06
CD200-201ENST00000315711 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
CD200-201ENST00000315711 CARMIL1Q5VZK9 1371 aa14.68□□□□□ -0.06
CD200-201ENST00000315711 APLP2Q06481 763 aa14.68□□□□□ -0.06
CD200-201ENST00000315711 ABCA10Q8WWZ4 1543 aa14.68□□□□□ -0.06
CD200-201ENST00000315711 POLA1P09884 1462 aaPredicted RBP14.66□□□□□ -0.06
CD200-201ENST00000315711 RAD54L2Q9Y4B4 1467 aa14.64□□□□□ -0.07
CD200-201ENST00000315711 KANK4Q5T7N3 995 aaPredicted RBP14.62□□□□□ -0.07
CD200-201ENST00000315711 WDR97A6NE52 1622 aa14.62□□□□□ -0.07
CD200-201ENST00000315711 URB2Q14146 1524 aaKnown RBP14.61□□□□□ -0.07
CD200-201ENST00000315711 PHF23Q9BUL5 403 aaPredicted RBP14.61□□□□□ -0.07
CD200-201ENST00000315711 HNRNPUL2Q1KMD3 747 aaKnown RBP14.6□□□□□ -0.07
CD200-201ENST00000315711 MAP3K1Q13233 1512 aa14.58□□□□□ -0.07
CD200-201ENST00000315711 CUL7Q14999 1698 aa14.58□□□□□ -0.08
CD200-201ENST00000315711 RRBP1Q9P2E9 1410 aaKnown RBP14.58□□□□□ -0.08
CD200-201ENST00000315711 DNAJC5BQ9UF47 199 aa14.56□□□□□ -0.08
CD200-201ENST00000315711 TIAM1Q13009 1591 aa14.54□□□□□ -0.08
CD200-201ENST00000315711 ABCA5Q8WWZ7 1642 aa14.53□□□□□ -0.08
CD200-201ENST00000315711 PDS5BQ9NTI5 1447 aa14.53□□□□□ -0.08
CD200-201ENST00000315711 KIF21AQ7Z4S6 1674 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms